Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 RNA5SP295-201ENST00000362655 121 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 MIR135A2-201ENST00000384854 100 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD13P35453 AL136372.1-201ENST00000403060 228 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 RPL30P2-201ENST00000414021 291 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXD13P35453 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXD13P35453 AC091286.1-201ENST00000431233 461 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXD13P35453 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXD13P35453 RAC1P7-201ENST00000445367 377 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AC104978.1-201ENST00000449387 391 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 MTND1P9-201ENST00000453775 944 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXD13P35453 SNORD105B-201ENST00000458770 79 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AC017015.1-201ENST00000477387 286 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AP001025.2-201ENST00000490908 477 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.85□□□□□ -1.79
HOXD13P35453 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXD13P35453 HMGB3P15-201ENST00000507326 574 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HOXD13P35453 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXD13P35453 AC017037.2-201ENST00000513850 890 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AC022483.1-201ENST00000514020 567 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXD13P35453 RN7SKP18-201ENST00000516005 275 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 RNU6-1231P-201ENST00000517185 103 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AC026403.1-201ENST00000518938 295 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC3.85□□□□□ -1.79
HOXD13P35453 AP001804.3-201ENST00000525146 880 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXD13P35453 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXD13P35453 OR4K8P-201ENST00000578842 1048 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 MIR4999-201ENST00000585029 91 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.85□□□□□ -1.79
HOXD13P35453 AC006116.10-201ENST00000591836 581 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AL355816.2-201ENST00000610049 647 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AL139418.1-201ENST00000613613 177 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AC018816.2-201ENST00000621460 353 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AP000770.2-201ENST00000623694 100 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 AL034408.1-202ENST00000636088 415 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.85□□□□□ -1.79
HOXD13P35453 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD13P35453 ZNF542P-204ENST00000482727 1305 ntBASIC3.85□□□□□ -1.79
HOXD13P35453 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.85□□□□□ -1.79
HOXD13P35453 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD13P35453 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
HOXD13P35453 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD13P35453 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.85□□□□□ -1.79
HOXD13P35453 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD13P35453 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
HOXD13P35453 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXD13P35453 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD13P35453 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
HOXD13P35453 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
HOXD13P35453 RNU6-343P-201ENST00000364709 104 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 RNU6-723P-201ENST00000383973 107 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 RNU6-1207P-201ENST00000384343 107 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 TAS2R15P-201ENST00000390674 928 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXD13P35453 RPS15AP38-201ENST00000413110 372 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 RPL9P9-201ENST00000418824 636 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXD13P35453 RPL21P32-201ENST00000419877 477 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 RPL17P36-201ENST00000420302 549 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 UBE2V1P13-201ENST00000436983 439 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 AL008629.1-201ENST00000438615 184 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXD13P35453 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXD13P35453 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXD13P35453 MRPS31P2-201ENST00000451581 518 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.84□□□□□ -1.79
HOXD13P35453 SNORD121B-201ENST00000458838 81 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 RPL23AP62-201ENST00000463396 453 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 RPS23P3-201ENST00000470993 430 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 AC034222.1-201ENST00000494052 532 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXD13P35453 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXD13P35453 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXD13P35453 RNU6-528P-201ENST00000516926 100 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXD13P35453 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXD13P35453 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXD13P35453 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.84□□□□□ -1.79
HOXD13P35453 ELOCP32-201ENST00000548625 324 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXD13P35453 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXD13P35453 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.84□□□□□ -1.79
HOXD13P35453 AC011468.4-201ENST00000603942 409 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 AC103710.3-201ENST00000608157 948 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 AP002826.1-201ENST00000608835 315 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 AC079395.3-201ENST00000615161 484 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
HOXD13P35453 AP003355.3-201ENST00000623465 114 ntBASIC3.84□□□□□ -1.79
HOXD13P35453 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.84□□□□□ -1.79
HOXD13P35453 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXD13P35453 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.84□□□□□ -1.79
HOXD13P35453 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
HOXD13P35453 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
HOXD13P35453 AL161912.2-201ENST00000565707 3007 ntBASIC3.84□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms