Protein–RNA interactions for Protein: P20908

COL5A1, Collagen alpha-1(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,838 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1P20908 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.37□□□□□ -2.03
COL5A1P20908 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC2.37□□□□□ -2.03
COL5A1P20908 AC093510.2-201ENST00000562820 896 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.37□□□□□ -2.03
COL5A1P20908 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.37□□□□□ -2.03
COL5A1P20908 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.37□□□□□ -2.03
COL5A1P20908 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.37□□□□□ -2.03
COL5A1P20908 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.37□□□□□ -2.03
COL5A1P20908 MTATP6P2-201ENST00000603319 678 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 AC008147.4-201ENST00000617570 1204 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.37□□□□□ -2.03
COL5A1P20908 MTND4P9-201ENST00000507819 1346 ntBASIC2.37□□□□□ -2.03
COL5A1P20908 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.36□□□□□ -2.03
COL5A1P20908 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL5A1P20908 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.36□□□□□ -2.03
COL5A1P20908 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL5A1P20908 RNU6-1159P-201ENST00000362933 107 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC2.36□□□□□ -2.03
COL5A1P20908 RNU1-73P-201ENST00000383971 164 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 SNORD65-201ENST00000391079 73 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 TAF9BP2-201ENST00000400856 499 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL5A1P20908 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC2.36□□□□□ -2.03
COL5A1P20908 ZNF736P7Y-201ENST00000425158 820 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.36□□□□□ -2.03
COL5A1P20908 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC2.36□□□□□ -2.03
COL5A1P20908 MTCO1P43-201ENST00000431831 488 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 AL590762.3-201ENST00000436372 640 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 AL645638.1-201ENST00000440519 361 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL5A1P20908 AC068587.2-201ENST00000478386 781 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 AC103975.1-201ENST00000482506 483 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 GTF2IP9-201ENST00000502460 301 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 AC133963.2-201ENST00000513686 578 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 AC068339.2-201ENST00000534395 618 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 AC025918.2-201ENST00000558683 763 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 AC022884.3-201ENST00000579571 248 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC2.36□□□□□ -2.03
COL5A1P20908 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC2.36□□□□□ -2.03
COL5A1P20908 MIR8084-201ENST00000614105 89 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 AC018926.1-201ENST00000616335 435 ntBASIC2.36□□□□□ -2.03
COL5A1P20908 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC2.36□□□□□ -2.03
COL5A1P20908 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
COL5A1P20908 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.36□□□□□ -2.03
COL5A1P20908 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
COL5A1P20908 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC2.36□□□□□ -2.03
COL5A1P20908 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL5A1P20908 RNU6-609P-201ENST00000365459 107 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.35□□□□□ -2.03
COL5A1P20908 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL5A1P20908 AL162578.1-201ENST00000406202 378 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 FAT1P1-201ENST00000406588 507 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 UBE2V1P9-201ENST00000414760 368 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 BX664727.1-201ENST00000416024 466 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.35□□□□□ -2.03
COL5A1P20908 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC2.35□□□□□ -2.03
COL5A1P20908 MTCYBP29-201ENST00000436327 1006 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC096638.1-201ENST00000444678 216 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 ZNF736P8Y-201ENST00000451913 669 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 UBE2V1P12-201ENST00000503954 474 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AP001372.4-201ENST00000524889 472 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.35□□□□□ -2.03
COL5A1P20908 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC2.35□□□□□ -2.03
COL5A1P20908 AC104229.1-201ENST00000561364 255 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
COL5A1P20908 AC124283.4-201ENST00000581815 456 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC2.35□□□□□ -2.03
COL5A1P20908 AC010620.2-201ENST00000600135 313 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC005021.1-201ENST00000608730 355 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AP003476.1-201ENST00000623984 516 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC2.35□□□□□ -2.03
COL5A1P20908 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.35□□□□□ -2.03
COL5A1P20908 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
COL5A1P20908 AC002543.1-201ENST00000299783 1954 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 SNORA72.3-201ENST00000365074 132 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
COL5A1P20908 DYNLT3P1-201ENST00000378574 347 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 RNU6-584P-201ENST00000410350 95 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 RPL26P37-201ENST00000411983 438 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 MTCYBP32-201ENST00000427945 1084 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 TRBV26OR9-2-201ENST00000432077 293 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AL512661.1-201ENST00000434586 1253 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.35□□□□□ -2.03
COL5A1P20908 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC2.35□□□□□ -2.03
COL5A1P20908 AC022431.1-201ENST00000450941 438 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC107222.1-201ENST00000510899 637 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC2.35□□□□□ -2.03
COL5A1P20908 SNORA76.2-201ENST00000517095 137 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 MTND2P32-201ENST00000521584 1038 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 HAUS1P3-201ENST00000523909 662 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC2.35□□□□□ -2.03
COL5A1P20908 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.35□□□□□ -2.03
COL5A1P20908 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC2.35□□□□□ -2.03
COL5A1P20908 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.35□□□□□ -2.03
COL5A1P20908 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.35□□□□□ -2.03
COL5A1P20908 AC010200.2-201ENST00000605098 235 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AP005229.2-201ENST00000609980 697 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 AC099778.2-201ENST00000610904 211 ntBASIC2.35□□□□□ -2.03
COL5A1P20908 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
COL5A1P20908 AC007275.1-201ENST00000621243 671 ntBASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms