Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 TXNP6-201ENST00000510190 310 ntBASIC4.32□□□□□ -1.72
RHOP08100 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.32□□□□□ -1.72
RHOP08100 AC093677.1-201ENST00000514414 678 ntBASIC4.32□□□□□ -1.72
RHOP08100 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
RHOP08100 RNA5SP143-201ENST00000516936 115 ntBASIC4.32□□□□□ -1.72
RHOP08100 RNU6-714P-201ENST00000516963 103 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC090151.1-201ENST00000520784 730 ntBASIC4.32□□□□□ -1.72
RHOP08100 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC4.32□□□□□ -1.72
RHOP08100 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.32□□□□□ -1.72
RHOP08100 AP001646.1-201ENST00000527936 915 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC109635.3-201ENST00000529536 185 ntBASIC4.32□□□□□ -1.72
RHOP08100 AL512310.1-201ENST00000548639 172 ntBASIC4.32□□□□□ -1.72
RHOP08100 ADI1P3-201ENST00000549509 470 ntBASIC4.32□□□□□ -1.72
RHOP08100 HMGB3P26-201ENST00000560051 582 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC120057.2-201ENST00000571520 271 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC053481.3-201ENST00000577881 843 ntBASIC4.32□□□□□ -1.72
RHOP08100 MIR5685-201ENST00000579080 79 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC011468.4-201ENST00000603942 409 ntBASIC4.32□□□□□ -1.72
RHOP08100 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 AC007363.1-201ENST00000604736 620 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC008536.2-201ENST00000607284 349 ntBASIC4.32□□□□□ -1.72
RHOP08100 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC4.32□□□□□ -1.72
RHOP08100 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 AL359314.1-201ENST00000616913 261 ntBASIC4.32□□□□□ -1.72
RHOP08100 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.32□□□□□ -1.72
RHOP08100 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 AC019278.1-201ENST00000623516 479 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC005609.4-201ENST00000625071 447 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC4.32□□□□□ -1.72
RHOP08100 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.32□□□□□ -1.72
RHOP08100 ERCC6-202ENST00000374127 1782 ntBASIC4.32□□□□□ -1.72
RHOP08100 AC016588.2-201ENST00000632484 3021 ntBASIC4.32□□□□□ -1.72
RHOP08100 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
RHOP08100 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
RHOP08100 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 Y_RNA.1-201ENST00000352915 104 ntBASIC4.31□□□□□ -1.72
RHOP08100 RNU6-730P-201ENST00000383954 104 ntBASIC4.31□□□□□ -1.72
RHOP08100 Y_RNA.573-201ENST00000384763 105 ntBASIC4.31□□□□□ -1.72
RHOP08100 RNU2-21P-201ENST00000410368 188 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC138393.2-201ENST00000414742 246 ntBASIC4.31□□□□□ -1.72
RHOP08100 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.31□□□□□ -1.72
RHOP08100 RBMY1KP-201ENST00000423480 476 ntBASIC4.31□□□□□ -1.72
RHOP08100 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
RHOP08100 AL691449.1-201ENST00000426570 421 ntBASIC4.31□□□□□ -1.72
RHOP08100 ISCA1P6-201ENST00000427740 390 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC133104.1-201ENST00000429100 218 ntBASIC4.31□□□□□ -1.72
RHOP08100 MTCYBP45-201ENST00000435243 565 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC105402.2-201ENST00000438503 358 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.31□□□□□ -1.72
RHOP08100 FABP3P2-201ENST00000453169 399 ntBASIC4.31□□□□□ -1.72
RHOP08100 AL445433.1-201ENST00000457507 257 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC4.31□□□□□ -1.72
RHOP08100 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.31□□□□□ -1.72
RHOP08100 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.31□□□□□ -1.72
RHOP08100 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.31□□□□□ -1.72
RHOP08100 Y_RNA.702-201ENST00000516843 96 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC022616.6-201ENST00000520479 119 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC4.31□□□□□ -1.72
RHOP08100 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.31□□□□□ -1.72
RHOP08100 AP003034.1-201ENST00000534621 422 ntBASIC4.31□□□□□ -1.72
RHOP08100 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.31□□□□□ -1.72
RHOP08100 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.31□□□□□ -1.72
RHOP08100 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.31□□□□□ -1.72
RHOP08100 AC107954.1-201ENST00000565906 727 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC4.31□□□□□ -1.72
RHOP08100 AL390208.1-201ENST00000605885 644 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC017083.3-201ENST00000609955 700 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC009237.17-201ENST00000618111 748 ntBASIC4.31□□□□□ -1.72
RHOP08100 AC039056.2-201ENST00000622261 511 ntBASIC4.31□□□□□ -1.72
RHOP08100 LRRC77P-213ENST00000637727 880 ntBASIC4.31□□□□□ -1.72
RHOP08100 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.31□□□□□ -1.72
RHOP08100 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
RHOP08100 AC073544.1-201ENST00000600110 1595 ntBASIC4.31□□□□□ -1.72
RHOP08100 EOGT-210ENST00000615922 1931 ntBASIC4.31□□□□□ -1.72
RHOP08100 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
RHOP08100 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHOP08100 ELL2P4-201ENST00000446870 1376 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC138915.3-201ENST00000562908 1389 ntBASIC4.3□□□□□ -1.72
RHOP08100 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
RHOP08100 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.3□□□□□ -1.72
RHOP08100 SNORA72.1-201ENST00000363485 129 ntBASIC4.3□□□□□ -1.72
RHOP08100 RNU6-1243P-201ENST00000364028 107 ntBASIC4.3□□□□□ -1.72
RHOP08100 RNU2-8P-201ENST00000410727 190 ntBASIC4.3□□□□□ -1.72
RHOP08100 RNU6-195P-201ENST00000411352 109 ntBASIC4.3□□□□□ -1.72
RHOP08100 AC069218.2-201ENST00000411665 344 ntBASIC4.3□□□□□ -1.72
RHOP08100 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC4.3□□□□□ -1.72
RHOP08100 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC4.3□□□□□ -1.72
RHOP08100 AL139413.1-201ENST00000421309 217 ntBASIC4.3□□□□□ -1.72
RHOP08100 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms