Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC2.55□□□□□ -2
SGCEO43556 RPL7P8-201ENST00000411964 730 ntBASIC2.55□□□□□ -2
SGCEO43556 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.55□□□□□ -2
SGCEO43556 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC2.55□□□□□ -2
SGCEO43556 AL592437.1-201ENST00000443781 492 ntBASIC2.55□□□□□ -2
SGCEO43556 AL671855.1-201ENST00000446875 1203 ntBASIC2.55□□□□□ -2
SGCEO43556 AC005002.1-201ENST00000447458 540 ntBASIC2.55□□□□□ -2
SGCEO43556 AL589880.1-201ENST00000448271 287 ntBASIC2.55□□□□□ -2
SGCEO43556 MTND3P4-201ENST00000453537 303 ntBASIC2.55□□□□□ -2
SGCEO43556 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC2.55□□□□□ -2
SGCEO43556 AP001992.1-205ENST00000462248 379 ntBASIC2.55□□□□□ -2
SGCEO43556 AC093767.1-201ENST00000504523 156 ntBASIC2.55□□□□□ -2
SGCEO43556 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.55□□□□□ -2
SGCEO43556 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.55□□□□□ -2
SGCEO43556 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.55□□□□□ -2
SGCEO43556 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.55□□□□□ -2
SGCEO43556 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.55□□□□□ -2
SGCEO43556 AC106734.1-201ENST00000568646 663 ntBASIC2.55□□□□□ -2
SGCEO43556 AC023824.3-201ENST00000569003 562 ntBASIC2.55□□□□□ -2
SGCEO43556 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.55□□□□□ -2
SGCEO43556 MIR3670-2-201ENST00000582974 65 ntBASIC2.55□□□□□ -2
SGCEO43556 MIR3670-1-201ENST00000584160 65 ntBASIC2.55□□□□□ -2
SGCEO43556 MIR3670-3-201ENST00000584855 65 ntBASIC2.55□□□□□ -2
SGCEO43556 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.55□□□□□ -2
SGCEO43556 KATNBL1P1-201ENST00000605192 748 ntBASIC2.55□□□□□ -2
SGCEO43556 MIR3670-4-201ENST00000612260 65 ntBASIC2.55□□□□□ -2
SGCEO43556 SNHG22-203ENST00000617833 660 ntBASIC2.55□□□□□ -2
SGCEO43556 AL353748.2-201ENST00000622148 471 ntBASIC2.55□□□□□ -2
SGCEO43556 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.55□□□□□ -2
SGCEO43556 AL121594.5-201ENST00000631724 573 ntBASIC2.55□□□□□ -2
SGCEO43556 MFSD8-213ENST00000641134 1327 ntBASIC2.55□□□□□ -2
SGCEO43556 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
SGCEO43556 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC2.55□□□□□ -2
SGCEO43556 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.54□□□□□ -2
SGCEO43556 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.54□□□□□ -2
SGCEO43556 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 SNORD56.4-201ENST00000363883 71 ntBASIC2.54□□□□□ -2
SGCEO43556 RNU6-851P-201ENST00000384565 107 ntBASIC2.54□□□□□ -2
SGCEO43556 U3.29-201ENST00000391296 212 ntBASIC2.54□□□□□ -2
SGCEO43556 FO393413.1-201ENST00000402892 195 ntBASIC2.54□□□□□ -2
SGCEO43556 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 AC092447.6-201ENST00000414578 210 ntBASIC2.54□□□□□ -2
SGCEO43556 BX682237.1-201ENST00000415016 335 ntBASIC2.54□□□□□ -2
SGCEO43556 AL137014.1-201ENST00000420490 1226 ntBASIC2.54□□□□□ -2
SGCEO43556 RPL27AP8-201ENST00000424277 446 ntBASIC2.54□□□□□ -2
SGCEO43556 EZH2P1-201ENST00000431167 291 ntBASIC2.54□□□□□ -2
SGCEO43556 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC2.54□□□□□ -2
SGCEO43556 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC2.54□□□□□ -2
SGCEO43556 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC2.54□□□□□ -2
SGCEO43556 AC234775.1-201ENST00000454247 670 ntBASIC2.54□□□□□ -2
SGCEO43556 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.54□□□□□ -2
SGCEO43556 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC2.54□□□□□ -2
SGCEO43556 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 SEM1P1-201ENST00000506694 209 ntBASIC2.54□□□□□ -2
SGCEO43556 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.54□□□□□ -2
SGCEO43556 SCGB1D5P-201ENST00000515134 247 ntBASIC2.54□□□□□ -2
SGCEO43556 RNA5SP341-201ENST00000516261 117 ntBASIC2.54□□□□□ -2
SGCEO43556 RN7SKP57-201ENST00000517248 293 ntBASIC2.54□□□□□ -2
SGCEO43556 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.54□□□□□ -2
SGCEO43556 ARL2BPP5-201ENST00000523141 481 ntBASIC2.54□□□□□ -2
SGCEO43556 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC2.54□□□□□ -2
SGCEO43556 AL020997.3-201ENST00000602843 359 ntBASIC2.54□□□□□ -2
SGCEO43556 RPL12P50-201ENST00000603116 116 ntBASIC2.54□□□□□ -2
SGCEO43556 AP002826.1-201ENST00000608835 315 ntBASIC2.54□□□□□ -2
SGCEO43556 AL162274.2-201ENST00000614406 332 ntBASIC2.54□□□□□ -2
SGCEO43556 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC2.54□□□□□ -2
SGCEO43556 AC006213.5-201ENST00000619673 288 ntBASIC2.54□□□□□ -2
SGCEO43556 Z99129.2-201ENST00000619967 314 ntBASIC2.54□□□□□ -2
SGCEO43556 AP006248.3-201ENST00000623580 594 ntBASIC2.54□□□□□ -2
SGCEO43556 AC010297.1-201ENST00000623948 149 ntBASIC2.54□□□□□ -2
SGCEO43556 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 FO624990.1-201ENST00000636373 85 ntBASIC2.54□□□□□ -2
SGCEO43556 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.54□□□□□ -2
SGCEO43556 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.54□□□□□ -2
SGCEO43556 AC087359.1-201ENST00000508335 1740 ntBASIC2.54□□□□□ -2
SGCEO43556 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.53□□□□□ -2
SGCEO43556 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
SGCEO43556 SGO1P1-201ENST00000603525 1447 ntBASIC2.53□□□□□ -2
SGCEO43556 ASNSP3-201ENST00000451989 1306 ntBASIC2.53□□□□□ -2
SGCEO43556 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.53□□□□□ -2
SGCEO43556 RNU1-35P-201ENST00000362782 153 ntBASIC2.53□□□□□ -2
SGCEO43556 SNORD21-201ENST00000383953 95 ntBASIC2.53□□□□□ -2
SGCEO43556 MIR512-1-201ENST00000384913 84 ntBASIC2.53□□□□□ -2
SGCEO43556 TMSB4XP8-201ENST00000402089 135 ntBASIC2.53□□□□□ -2
SGCEO43556 ERMN-204ENST00000409925 556 ntTSL 4 BASIC2.53□□□□□ -2
SGCEO43556 TRIM60P5Y-201ENST00000413946 574 ntBASIC2.53□□□□□ -2
SGCEO43556 TMSB4XP6-201ENST00000415187 135 ntBASIC2.53□□□□□ -2
SGCEO43556 AL451074.5-201ENST00000415894 435 ntBASIC2.53□□□□□ -2
SGCEO43556 RPL7P30-201ENST00000420888 709 ntBASIC2.53□□□□□ -2
SGCEO43556 TMSB4XP1-201ENST00000424567 135 ntBASIC2.53□□□□□ -2
SGCEO43556 AC012497.1-201ENST00000429392 575 ntBASIC2.53□□□□□ -2
SGCEO43556 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.53□□□□□ -2
SGCEO43556 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.53□□□□□ -2
SGCEO43556 AC092798.1-201ENST00000458542 409 ntBASIC2.53□□□□□ -2
SGCEO43556 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms