Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 MTCYBP34-201ENST00000439552 670 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AL500527.1-201ENST00000448532 255 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AC104073.1-201ENST00000451988 151 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 ARL4AP2-201ENST00000507378 601 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 SCGB1D5P-201ENST00000515134 247 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 SNRPGP16-201ENST00000533275 226 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 MIR3162-201ENST00000581818 82 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AL033523.1-201ENST00000605153 153 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AC107294.1-201ENST00000609524 467 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 AC244517.1-201ENST00000606030 2086 ntBASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.48□□□□□ -1.85
CTNNA3Q9UI47 API5P2-201ENST00000397055 1498 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 FAM35BP-202ENST00000497389 3337 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 U8.9-201ENST00000365667 134 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 RNA5SP80-201ENST00000410475 111 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AL139413.1-201ENST00000421309 217 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AL035410.1-201ENST00000427409 427 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 RPL32P28-201ENST00000443577 397 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AL592437.1-201ENST00000443781 492 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 RNA5SP310-201ENST00000459084 116 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AP004217.1-201ENST00000480579 346 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AC026412.2-201ENST00000512270 1075 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 IGJP1-201ENST00000522682 475 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AP001804.3-201ENST00000525146 880 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 LSM6P2-201ENST00000552208 177 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AC034268.2-201ENST00000571784 482 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AC013412.1-201ENST00000610687 192 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AC006329.2-201ENST00000611491 394 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AL163051.2-201ENST00000618976 735 ntBASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CTNNA3Q9UI47 AC010733.2-201ENST00000589496 5702 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 MIR449A-201ENST00000362113 91 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 MIR887-201ENST00000401258 79 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 UBE2V1P15-201ENST00000407776 448 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 RNU6-712P-201ENST00000410558 100 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 RNA5SP38-201ENST00000410750 119 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 RPL23AP31-201ENST00000456160 467 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 RPL31P50-201ENST00000471002 296 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 VN1R104P-201ENST00000505115 1009 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 AC103783.1-201ENST00000520506 373 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 LINC00557-201ENST00000563184 1279 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 OR4H6P-202ENST00000603819 340 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 RMST_10.1-201ENST00000616309 154 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 ATP5A1P2-202ENST00000616464 443 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 Z99129.2-201ENST00000619967 314 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 AC022509.4-201ENST00000621404 572 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 AC111188.2-201ENST00000529697 1387 ntBASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.46□□□□□ -1.86
CTNNA3Q9UI47 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 RNU1-35P-201ENST00000362782 153 ntBASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 RNU6-1074P-201ENST00000383995 104 ntBASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 AL445529.1-201ENST00000398713 389 ntBASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 UBE2V1P6-201ENST00000430840 422 ntBASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 RPS20P5-201ENST00000434808 360 ntBASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 AC096751.1-202ENST00000502691 1067 ntBASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 OSBPL9P3-201ENST00000534523 595 ntBASIC3.45□□□□□ -1.86
CTNNA3Q9UI47 MIR3945-201ENST00000581853 98 ntBASIC3.45□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms