Protein–RNA interactions for Protein: Q9NNX9

VCX3A, Variable charge X-linked protein 3, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3AQ9NNX9 AC107222.1-201ENST00000510899 637 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.58□□□□□ -2
VCX3AQ9NNX9 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 HMGB1P1-201ENST00000522557 636 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.58□□□□□ -2
VCX3AQ9NNX9 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 AC104785.1-201ENST00000603220 588 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 RPL23AP92-201ENST00000603609 255 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 AL645944.1-201ENST00000603857 493 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC2.58□□□□□ -2
VCX3AQ9NNX9 AC027309.3-201ENST00000623419 351 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 GDI2P1-201ENST00000429312 1336 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 MTCO1P23-201ENST00000415223 1526 ntBASIC2.58□□□□□ -2
VCX3AQ9NNX9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 OR6K3-202ENST00000368146 996 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 MIR218-2-201ENST00000385006 110 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 RNU6-882P-201ENST00000391025 103 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 MTCO2P31-201ENST00000402702 684 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 RN7SKP278-201ENST00000410504 342 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 RNU2-15P-201ENST00000410692 191 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC063979.1-201ENST00000415539 377 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 HSFY4P-201ENST00000415994 1181 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 USP9YP27-201ENST00000418455 438 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 KRR1P1-201ENST00000419430 803 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC092573.2-201ENST00000434546 243 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 RPS12P2-201ENST00000439728 269 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 RN7SL863P-201ENST00000462370 296 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 XACT-201ENST00000468762 497 ntTSL 5 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC003982.1-202ENST00000469928 248 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC135721.1-201ENST00000497954 479 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC118282.2-201ENST00000508739 374 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 MTCO1P35-201ENST00000515270 228 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 RNA5SP135-201ENST00000517019 125 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC087272.1-201ENST00000523624 533 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AP003102.1-201ENST00000525638 661 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 RPL21P12-201ENST00000559810 515 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 MIR3609-201ENST00000582661 80 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC010620.2-201ENST00000600135 313 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC013244.1-201ENST00000604279 193 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC024940.4-201ENST00000605507 246 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC100814.1-201ENST00000606963 623 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.57□□□□□ -2
VCX3AQ9NNX9 PABPC1P9-201ENST00000426076 1612 ntBASIC2.57□□□□□ -2
VCX3AQ9NNX9 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.57□□□□□ -2
VCX3AQ9NNX9 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VCX3AQ9NNX9 MIR16-2-201ENST00000362117 81 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 RNU6-353P-201ENST00000364266 108 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 RNA5SP139-201ENST00000364340 117 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL137014.1-201ENST00000420490 1226 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 SFR1P2-201ENST00000421841 730 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 RPS29P33-201ENST00000456717 146 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 PNPLA4P1-201ENST00000458328 305 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AC109925.1-201ENST00000478069 331 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 RPL31P60-201ENST00000478450 367 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 NPM1P41-201ENST00000512920 831 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL731537.2-201ENST00000561565 951 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 AC093519.1-201ENST00000566109 298 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 LARP7P2-201ENST00000575306 125 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC2.56□□□□□ -2
VCX3AQ9NNX9 AC006130.2-201ENST00000586202 326 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 ZNF861P-201ENST00000588126 639 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 AL445423.1-201ENST00000609941 536 ntBASIC2.56□□□□□ -2
VCX3AQ9NNX9 MIR6895-201ENST00000613497 78 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms