Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
CHMP1AQ9HD42 AL513185.3-201ENST00000433335 1300 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AF127577.6-201ENST00000623352 2191 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 Y_RNA.46-201ENST00000362695 102 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 RNU1-18P-201ENST00000363062 164 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 RNU5E-8P-201ENST00000363502 116 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 MIR323B-201ENST00000385269 82 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 RPS20P2-201ENST00000402520 389 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 MTATP6P4-201ENST00000427725 675 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 RPL23AP1-201ENST00000428990 471 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC244035.1-201ENST00000430042 390 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC024082.2-201ENST00000434771 238 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC083863.1-201ENST00000438811 231 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 RPS11P1-201ENST00000451072 473 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC073387.1-201ENST00000453261 709 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 HMGN2P16-201ENST00000456802 261 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 RN7SL93P-201ENST00000463035 293 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AP000797.1-201ENST00000478870 387 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 RNU6-798P-201ENST00000516912 103 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC093331.1-201ENST00000521474 169 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC008489.1-201ENST00000524271 483 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AL133271.1-201ENST00000538229 291 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 OR4T1P-201ENST00000554933 911 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 ZNF192P1-203ENST00000565888 810 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AP005136.1-201ENST00000579765 429 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 MIR548AB-201ENST00000584917 84 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 TPMTP1-201ENST00000592307 737 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 BDH2P1-201ENST00000602288 736 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 Z94722.1-201ENST00000604328 474 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AL451086.1-201ENST00000605596 223 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC097065.2-201ENST00000608159 533 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC012360.2-201ENST00000609349 391 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC006023.2-201ENST00000609916 167 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AL355472.4-201ENST00000610233 626 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 Mico1.1-201ENST00000611698 204 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC243312.2-201ENST00000623340 601 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC244205.2-202ENST00000635781 342 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC244258.1-201ENST00000637553 1071 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 IPO8P1-201ENST00000455509 3109 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC091152.2-201ENST00000591628 2569 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC006504.1-201ENST00000562493 3666 ntBASIC3.45□□□□□ -1.86
CHMP1AQ9HD42 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC079741.1-201ENST00000321498 212 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AL121657.1-201ENST00000327215 531 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 RNU6-637P-201ENST00000384050 107 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 SNORD116-1-201ENST00000384335 95 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 HMGN2P8-201ENST00000391458 268 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 RN7SKP182-201ENST00000410772 298 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC011933.1-201ENST00000413334 321 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 CRYBB2P1-203ENST00000415709 538 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 TCF7L1-IT1-201ENST00000433581 458 ntTSL 3 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 FTH1P1-201ENST00000437933 532 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 RABEPKP1-201ENST00000440529 1026 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 RPL26P6-201ENST00000440913 438 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 TPT1P14-201ENST00000448018 505 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC098824.1-201ENST00000453565 980 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC116533.1-201ENST00000459748 321 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 RPS3AP50-201ENST00000487064 803 ntBASIC3.44□□□□□ -1.86
CHMP1AQ9HD42 AC055855.1-201ENST00000489563 579 ntBASIC3.44□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 120.9 ms