Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AL445669.2-201ENST00000454425 421 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AC007182.2-201ENST00000489251 402 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AC114786.4-201ENST00000508771 728 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AC114797.1-201ENST00000514003 728 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 XPOTP1-201ENST00000443317 2398 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 ATP5F1P1-201ENST00000433775 569 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AC009474.2-201ENST00000451383 136 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 ARL4AP2-201ENST00000507378 601 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AC012182.1-201ENST00000570133 895 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 AL356266.1-201ENST00000623311 483 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 CU459211.1-201ENST00000635667 749 ntBASIC1.96□□□□□ -2.1
CHD8Q9HCK8 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
CHD8Q9HCK8 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 Y_RNA.115-201ENST00000363272 98 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 Z98941.1-201ENST00000407764 100 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 RNA5SP383-201ENST00000362934 120 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 EI24P1-201ENST00000416584 867 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 AC105402.2-201ENST00000438503 358 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 AL138799.3-201ENST00000438968 350 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 AL139109.1-201ENST00000455491 297 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 BX322784.1-201ENST00000455793 1077 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 AC022513.1-201ENST00000624512 117 ntBASIC1.95□□□□□ -2.1
CHD8Q9HCK8 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.95□□□□□ -2.1
CHD8Q9HCK8 DCAF13P1-201ENST00000495256 1330 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 RNA5SP257-201ENST00000363023 116 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 RNU6-805P-201ENST00000365643 106 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AL590004.2-201ENST00000404787 371 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 RN7SKP285-201ENST00000410137 318 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AC092427.1-202ENST00000430569 476 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 PPIAP17-201ENST00000438507 471 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 RPL23AP35-201ENST00000451906 501 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AC002553.2-201ENST00000453217 340 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 DYNLL1P6-201ENST00000503440 264 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 RNU6-1223P-201ENST00000517124 104 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 HIGD1AP10-201ENST00000527837 282 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 MIR6086-201ENST00000638065 55 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AMD1P2-201ENST00000412936 992 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 GTF2IP23-201ENST00000423746 351 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AC147055.1-201ENST00000509261 750 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AC036111.3-201ENST00000526389 112 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 AC098848.2-201ENST00000588023 330 ntBASIC1.94□□□□□ -2.1
CHD8Q9HCK8 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
CHD8Q9HCK8 MAPK10-266ENST00000641066 6555 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AL034379.1-201ENST00000423216 253 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 RPL21P71-201ENST00000465598 459 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 MIR1273G-201ENST00000577677 100 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AC016727.2-201ENST00000603988 621 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AL365503.1-201ENST00000605247 905 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AC093591.3-201ENST00000634516 308 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AC234782.4-201ENST00000417646 1048 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 Z99714.1-201ENST00000450463 807 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 RPS29P1-201ENST00000465274 159 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AC104564.1-201ENST00000493028 407 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.93□□□□□ -2.1
CHD8Q9HCK8 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.93□□□□□ -2.1
CHD8Q9HCK8 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.92□□□□□ -2.1
CHD8Q9HCK8 AL355596.1-201ENST00000565399 3996 ntBASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms