Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC104057.1-201ENST00000515547 497 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AL132857.1-201ENST00000555180 708 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC006270.2-201ENST00000578523 652 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 MTCO2P2-201ENST00000591258 225 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC010338.1-201ENST00000621823 717 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC023510.2-201ENST00000622162 746 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC009039.2-201ENST00000624524 529 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AC068620.4-201ENST00000636730 1182 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 AL359893.1-201ENST00000447628 1580 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 DBF4P1-201ENST00000412976 1892 ntBASIC3.41□□□□□ -1.86
RNF41Q9H4P4 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.86
RNF41Q9H4P4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.4□□□□□ -1.86
RNF41Q9H4P4 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 RNU6-1300P-201ENST00000391046 108 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC092634.6-201ENST00000418558 192 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 RPS3AP37-201ENST00000419176 745 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 HSFY1P1-201ENST00000423928 1178 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 SEPT7P5-201ENST00000434048 306 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 HMGN2P21-201ENST00000447764 270 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 RPL37P4-201ENST00000448908 268 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 ZNF886P-201ENST00000450781 723 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 NIPA2P5-201ENST00000452282 464 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 HMGB3P30-201ENST00000457863 606 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 DSTNP2-201ENST00000504533 515 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC113347.3-201ENST00000509113 148 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 HIGD1AP3-201ENST00000515857 278 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AP001317.1-201ENST00000531194 960 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC093519.1-201ENST00000566109 298 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC055876.1-202ENST00000567053 138 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 MIR4760-201ENST00000585040 80 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC024153.1-201ENST00000603103 365 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 MTND3P19-201ENST00000603825 345 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AL160281.1-201ENST00000605307 311 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AL513477.2-201ENST00000607858 568 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC009974.1-201ENST00000608881 455 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC024257.5-201ENST00000612739 531 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 Z99129.2-201ENST00000619967 314 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC091046.2-201ENST00000620775 665 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AL512506.2-201ENST00000624472 458 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC026634.1-201ENST00000634369 198 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 ZNF663P-202ENST00000641770 1131 ntBASIC3.4□□□□□ -1.87
RNF41Q9H4P4 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.4□□□□□ -1.87
RNF41Q9H4P4 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AL079305.1-201ENST00000623159 3008 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 RNU1-35P-201ENST00000362782 153 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 RNU6-1066P-201ENST00000363573 105 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 RNA5SP167-201ENST00000365461 116 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 Y_RNA.408-201ENST00000383987 102 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 RNU6-1242P-201ENST00000391052 103 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 ERHP2-201ENST00000402323 299 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC073264.1-201ENST00000411508 416 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AL513175.2-201ENST00000422071 443 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC092648.1-201ENST00000425870 423 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC114973.1-201ENST00000429057 632 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AL138799.3-201ENST00000438968 350 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 RPL29P29-201ENST00000448725 423 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 NDUFA5P7-201ENST00000452914 242 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC092185.1-201ENST00000491371 97 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC114322.1-201ENST00000506771 926 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.39□□□□□ -1.87
RNF41Q9H4P4 RN7SKP31-201ENST00000516354 278 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 SNORA48.10-201ENST00000516965 160 ntBASIC3.39□□□□□ -1.87
RNF41Q9H4P4 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms