Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 RNU7-143P-201ENST00000516781 65 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RNU6-798P-201ENST00000516912 103 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 MIR4737-201ENST00000583979 81 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 PIGPP4-201ENST00000584447 307 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC110760.3-201ENST00000598794 467 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC068790.3-201ENST00000602988 553 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 OR10AB1P-201ENST00000609613 938 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC027807.2-201ENST00000616099 408 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AL591424.2-201ENST00000617023 128 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 XIST_intron.1-201ENST00000619444 68 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AL139089.1-201ENST00000620372 975 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AL159972.1-201ENST00000625150 448 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 WDR75-207ENST00000631047 270 ntTSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 AC005832.2-201ENST00000538921 1430 ntBASIC3.77□□□□□ -1.81
NR1H4Q96RI1 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NR1H4Q96RI1 MTND4P4-201ENST00000439033 1366 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 RNU6-432P-201ENST00000384196 109 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 HSPE1P26-201ENST00000405341 275 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 MIR1251-201ENST00000408552 70 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 RPL7AP73-201ENST00000413490 353 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC244035.1-201ENST00000430042 390 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 HMGB1P12-201ENST00000438594 598 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 RPL12P3-201ENST00000440080 396 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC118469.1-201ENST00000442943 488 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC239367.2-201ENST00000447309 705 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC006539.3-201ENST00000454258 129 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC007967.1-201ENST00000455422 1159 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 UBE2CP3-201ENST00000502715 450 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 RNA5SP468-201ENST00000516782 93 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 RNU6-1003P-201ENST00000517099 105 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AP000907.2-201ENST00000530827 353 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AP001781.1-201ENST00000530977 207 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC012417.1-201ENST00000582307 1039 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC013244.1-201ENST00000604279 193 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AL133243.1-201ENST00000614487 366 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 MIR6719-201ENST00000622428 87 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 Z69908.1-201ENST00000622603 247 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC025048.6-202ENST00000627667 438 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
NR1H4Q96RI1 AC005183.1-201ENST00000603687 1979 ntBASIC3.76□□□□□ -1.81
NR1H4Q96RI1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 MTND5P33-201ENST00000571250 1450 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 RNU5E-5P-201ENST00000365379 116 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 MIR659-201ENST00000384963 97 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 RPS3AP24-201ENST00000407896 734 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 SNORA57.3-201ENST00000411095 141 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AL139095.3-201ENST00000419672 1203 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 SCP2-206ENST00000430330 938 ntTSL 2 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AC024082.2-201ENST00000434771 238 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 NDUFA5P12-201ENST00000503796 343 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AC008638.1-201ENST00000506035 866 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 AC105313.1-201ENST00000509121 353 ntBASIC3.75□□□□□ -1.81
NR1H4Q96RI1 RN7SKP289-201ENST00000517244 295 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 142.5 ms