Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 MTATP8P1-201ENST00000467115 207 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 DYNLL1P5-201ENST00000467158 270 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 RPS4XP1-201ENST00000482189 787 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 RN7SL814P-201ENST00000487715 300 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AP002812.1-201ENST00000495378 474 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 ATP5LP3-201ENST00000514223 304 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 RNU6-1069P-201ENST00000516612 133 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 FTH1P11-201ENST00000517577 551 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AC009812.2-201ENST00000517657 457 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AC127381.1-201ENST00000555979 939 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AC174048.1-201ENST00000603389 144 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AC008814.1-201ENST00000603797 406 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 MIR6862-1-201ENST00000613016 70 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 MIR6862-2-201ENST00000614755 70 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 FAM157A-202ENST00000615155 405 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 MIR6729-201ENST00000618194 65 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 MIR4302-201ENST00000638058 60 ntBASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
UBE3DQ7Z6J8 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 MTCO1P24-201ENST00000515438 1558 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 U3.2-201ENST00000362981 210 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 RNY1P14-201ENST00000384426 108 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 Y_RNA.574-201ENST00000384766 95 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 ENSAP1-201ENST00000392855 326 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AL391361.1-201ENST00000405580 489 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 RN7SKP159-201ENST00000410657 292 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 RPS15AP40-201ENST00000419621 391 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 GNG5P5-201ENST00000420444 220 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AL160004.2-201ENST00000432935 350 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 FTLP19-201ENST00000433300 394 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 PPIAP20-201ENST00000449839 135 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AC010683.1-201ENST00000473673 378 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 RN7SL283P-201ENST00000489055 303 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AC026801.1-201ENST00000497178 464 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 SNORA14.1-201ENST00000516113 141 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 RNU6-1213P-201ENST00000517075 94 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 RNU1-54P-201ENST00000517181 120 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 Y_RNA.721-201ENST00000517207 102 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 APAF1-207ENST00000547743 651 ntTSL 3 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 BNIP3P16-201ENST00000589779 534 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AC069307.1-201ENST00000602820 447 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AC020910.3-201ENST00000603701 874 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 IMMP1LP3-201ENST00000604197 224 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 EFTUD1P2-201ENST00000514817 1603 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 AC011755.1-201ENST00000623763 2049 ntBASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
UBE3DQ7Z6J8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 U3.3-201ENST00000362986 216 ntBASIC5□□□□□ -1.61
UBE3DQ7Z6J8 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
UBE3DQ7Z6J8 RNU6-784P-201ENST00000384330 106 ntBASIC5□□□□□ -1.61
UBE3DQ7Z6J8 RNU6-434P-201ENST00000384376 107 ntBASIC5□□□□□ -1.61
UBE3DQ7Z6J8 Y_RNA.527-201ENST00000384573 102 ntBASIC5□□□□□ -1.61
UBE3DQ7Z6J8 MIR105-1-201ENST00000385222 81 ntBASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms