Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TNFP01375 AC010733.2-201ENST00000589496 5702 ntBASIC2.19□□□□□ -2.06
TNFP01375 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.19□□□□□ -2.06
TNFP01375 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
TNFP01375 RNU6-50P-201ENST00000362356 103 ntBASIC2.19□□□□□ -2.06
TNFP01375 DEFA7P-201ENST00000382676 285 ntBASIC2.19□□□□□ -2.06
TNFP01375 AL591416.1-201ENST00000404015 867 ntBASIC2.19□□□□□ -2.06
TNFP01375 SNORA11.4-201ENST00000408823 129 ntBASIC2.19□□□□□ -2.06
TNFP01375 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFP01375 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFP01375 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFP01375 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.19□□□□□ -2.06
TNFP01375 AL513343.1-201ENST00000451818 792 ntBASIC2.19□□□□□ -2.06
TNFP01375 snoU13.15-201ENST00000459407 104 ntBASIC2.19□□□□□ -2.06
TNFP01375 SNORA31.15-201ENST00000516771 132 ntBASIC2.19□□□□□ -2.06
TNFP01375 AP003467.2-201ENST00000520175 319 ntBASIC2.19□□□□□ -2.06
TNFP01375 MAL2-205ENST00000521048 575 ntTSL 4 BASIC2.19□□□□□ -2.06
TNFP01375 AC134043.1-201ENST00000521204 638 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFP01375 IGKV3-31-201ENST00000523109 329 ntBASIC2.19□□□□□ -2.06
TNFP01375 OR4R2P-201ENST00000530815 597 ntBASIC2.19□□□□□ -2.06
TNFP01375 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.19□□□□□ -2.06
TNFP01375 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TNFP01375 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC2.19□□□□□ -2.06
TNFP01375 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFP01375 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFP01375 AL136981.2-201ENST00000617319 734 ntBASIC2.19□□□□□ -2.06
TNFP01375 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFP01375 MIR4496-201ENST00000635896 61 ntBASIC2.19□□□□□ -2.06
TNFP01375 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.19□□□□□ -2.06
TNFP01375 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TNFP01375 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TNFP01375 AC104454.1-201ENST00000421341 1401 ntBASIC2.18□□□□□ -2.06
TNFP01375 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
TNFP01375 RPL21P132-201ENST00000331267 462 ntBASIC2.18□□□□□ -2.06
TNFP01375 RNU6-697P-201ENST00000363348 107 ntBASIC2.18□□□□□ -2.06
TNFP01375 SNORA14A-201ENST00000364773 135 ntBASIC2.18□□□□□ -2.06
TNFP01375 AC240504.1-201ENST00000395709 845 ntBASIC2.18□□□□□ -2.06
TNFP01375 TOMM22P1-201ENST00000418578 312 ntBASIC2.18□□□□□ -2.06
TNFP01375 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.18□□□□□ -2.06
TNFP01375 HMGN1P5-201ENST00000448591 263 ntBASIC2.18□□□□□ -2.06
TNFP01375 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.18□□□□□ -2.06
TNFP01375 TRBV26-201ENST00000456572 344 ntBASIC2.18□□□□□ -2.06
TNFP01375 RPL30P9-201ENST00000465586 330 ntBASIC2.18□□□□□ -2.06
TNFP01375 AC009901.1-201ENST00000506703 541 ntBASIC2.18□□□□□ -2.06
TNFP01375 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
TNFP01375 NPM1P52-201ENST00000518264 846 ntBASIC2.18□□□□□ -2.06
TNFP01375 DNAJC8P1-201ENST00000554535 372 ntBASIC2.18□□□□□ -2.06
TNFP01375 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC2.18□□□□□ -2.06
TNFP01375 AC090312.2-201ENST00000582687 378 ntBASIC2.18□□□□□ -2.06
TNFP01375 DUXAP3-201ENST00000603616 594 ntBASIC2.18□□□□□ -2.06
TNFP01375 AL645944.1-201ENST00000603857 493 ntBASIC2.18□□□□□ -2.06
TNFP01375 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC2.18□□□□□ -2.06
TNFP01375 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
TNFP01375 AC002064.3-201ENST00000623448 346 ntBASIC2.18□□□□□ -2.06
TNFP01375 AP003122.6-201ENST00000623831 495 ntBASIC2.18□□□□□ -2.06
TNFP01375 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC2.18□□□□□ -2.06
TNFP01375 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.18□□□□□ -2.06
TNFP01375 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
TNFP01375 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.18□□□□□ -2.06
TNFP01375 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TNFP01375 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TNFP01375 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TNFP01375 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TNFP01375 RNA5SP393-201ENST00000363423 117 ntBASIC2.17□□□□□ -2.06
TNFP01375 RNU6-532P-201ENST00000384318 107 ntBASIC2.17□□□□□ -2.06
TNFP01375 DNAJC19P6-201ENST00000401853 280 ntBASIC2.17□□□□□ -2.06
TNFP01375 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFP01375 RN7SKP32-201ENST00000410167 303 ntBASIC2.17□□□□□ -2.06
TNFP01375 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.17□□□□□ -2.06
TNFP01375 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFP01375 AC233728.2-201ENST00000425348 757 ntBASIC2.17□□□□□ -2.06
TNFP01375 AC023347.2-201ENST00000433994 462 ntBASIC2.17□□□□□ -2.06
TNFP01375 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFP01375 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.17□□□□□ -2.06
TNFP01375 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFP01375 TPMTP4-201ENST00000450749 678 ntBASIC2.17□□□□□ -2.06
TNFP01375 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFP01375 OR4G11P-201ENST00000492842 939 ntBASIC2.17□□□□□ -2.06
TNFP01375 RNA5SP200-201ENST00000516360 103 ntBASIC2.17□□□□□ -2.06
TNFP01375 AC019227.1-201ENST00000526902 510 ntBASIC2.17□□□□□ -2.06
TNFP01375 RANP3-201ENST00000530970 276 ntBASIC2.17□□□□□ -2.06
TNFP01375 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFP01375 MIR3124-201ENST00000582636 67 ntBASIC2.17□□□□□ -2.06
TNFP01375 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFP01375 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC2.17□□□□□ -2.06
TNFP01375 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.17□□□□□ -2.06
TNFP01375 AC008962.1-201ENST00000605729 304 ntBASIC2.17□□□□□ -2.06
TNFP01375 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.17□□□□□ -2.06
TNFP01375 AC140725.3-201ENST00000616193 880 ntBASIC2.17□□□□□ -2.06
TNFP01375 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.17□□□□□ -2.06
TNFP01375 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
TNFP01375 MIR6073-201ENST00000352083 89 ntBASIC2.16□□□□□ -2.06
TNFP01375 AL356057.2-201ENST00000403318 432 ntBASIC2.16□□□□□ -2.06
TNFP01375 RNU4-26P-201ENST00000410270 107 ntBASIC2.16□□□□□ -2.06
TNFP01375 OR51A3P-201ENST00000413596 924 ntBASIC2.16□□□□□ -2.06
TNFP01375 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.16□□□□□ -2.06
TNFP01375 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.16□□□□□ -2.06
TNFP01375 MTATP6P4-201ENST00000427725 675 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 138.8 ms