Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 NUP58P1-201ENST00000502546 1738 ntBASIC0.94□□□□□ -2.26
USH2AO75445 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC0.93□□□□□ -2.26
USH2AO75445 RNU6-37P-201ENST00000362692 107 ntBASIC0.93□□□□□ -2.26
USH2AO75445 RNU6-11P-201ENST00000364234 107 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC098934.3-201ENST00000430450 190 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC0.93□□□□□ -2.26
USH2AO75445 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC0.93□□□□□ -2.26
USH2AO75445 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC0.93□□□□□ -2.26
USH2AO75445 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC0.93□□□□□ -2.26
USH2AO75445 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC0.93□□□□□ -2.26
USH2AO75445 MIR219B-201ENST00000637023 88 ntBASIC0.93□□□□□ -2.26
USH2AO75445 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC0.93□□□□□ -2.26
USH2AO75445 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
USH2AO75445 RN7SKP226-201ENST00000364912 300 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC027124.2-201ENST00000428249 105 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC0.93□□□□□ -2.26
USH2AO75445 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC0.93□□□□□ -2.26
USH2AO75445 AL118520.1-201ENST00000450770 291 ntBASIC0.93□□□□□ -2.26
USH2AO75445 VWA8P1-201ENST00000510889 176 ntBASIC0.93□□□□□ -2.26
USH2AO75445 OR4A45P-201ENST00000529954 901 ntBASIC0.93□□□□□ -2.26
USH2AO75445 GLYCAM1-201ENST00000546596 285 ntBASIC0.93□□□□□ -2.26
USH2AO75445 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC0.93□□□□□ -2.26
USH2AO75445 AC103858.2-201ENST00000621471 543 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC022513.1-201ENST00000624512 117 ntBASIC0.93□□□□□ -2.26
USH2AO75445 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC0.93□□□□□ -2.26
USH2AO75445 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
USH2AO75445 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC0.93□□□□□ -2.26
USH2AO75445 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC0.93□□□□□ -2.26
USH2AO75445 AC006378.2-201ENST00000623178 2476 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC093831.2-201ENST00000624393 3427 ntBASIC0.93□□□□□ -2.26
USH2AO75445 MIR142-201ENST00000384835 87 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AL354719.1-201ENST00000406535 843 ntBASIC0.93□□□□□ -2.26
USH2AO75445 MTCYBP7-201ENST00000419540 1134 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC0.93□□□□□ -2.26
USH2AO75445 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC0.93□□□□□ -2.26
USH2AO75445 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.93□□□□□ -2.26
USH2AO75445 ASNSP4-201ENST00000511103 447 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC0.93□□□□□ -2.26
USH2AO75445 AC006116.7-201ENST00000590141 756 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC0.93□□□□□ -2.26
USH2AO75445 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC0.93□□□□□ -2.26
USH2AO75445 MTCO2P17-201ENST00000424336 677 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC244033.1-201ENST00000426826 870 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC0.93□□□□□ -2.26
USH2AO75445 AC104090.1-201ENST00000506341 1171 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC108078.1-201ENST00000508073 725 ntBASIC0.93□□□□□ -2.26
USH2AO75445 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC0.93□□□□□ -2.26
USH2AO75445 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC0.93□□□□□ -2.26
USH2AO75445 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC0.93□□□□□ -2.26
USH2AO75445 MIR4255-201ENST00000579351 72 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AL450489.1-201ENST00000612071 468 ntBASIC0.93□□□□□ -2.26
USH2AO75445 AC093909.5-201ENST00000621839 1799 ntBASIC0.93□□□□□ -2.26
USH2AO75445 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC0.93□□□□□ -2.26
USH2AO75445 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC0.93□□□□□ -2.26
USH2AO75445 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC0.93□□□□□ -2.26
USH2AO75445 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 RNA5SP383-201ENST00000362934 120 ntBASIC0.92□□□□□ -2.26
USH2AO75445 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
USH2AO75445 VN1R108P-201ENST00000431580 830 ntBASIC0.92□□□□□ -2.26
USH2AO75445 BX679664.1-201ENST00000434429 253 ntBASIC0.92□□□□□ -2.26
USH2AO75445 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 SNORA9.3-201ENST00000516383 129 ntBASIC0.92□□□□□ -2.26
USH2AO75445 SULT1C2P1-202ENST00000562418 459 ntBASIC0.92□□□□□ -2.26
USH2AO75445 MIR4723-201ENST00000585070 81 ntBASIC0.92□□□□□ -2.26
USH2AO75445 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC0.92□□□□□ -2.26
USH2AO75445 AC006023.2-201ENST00000609916 167 ntBASIC0.92□□□□□ -2.26
USH2AO75445 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 AL353743.4-201ENST00000422653 1547 ntBASIC0.92□□□□□ -2.26
USH2AO75445 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC0.92□□□□□ -2.26
USH2AO75445 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC0.92□□□□□ -2.26
USH2AO75445 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC0.92□□□□□ -2.26
USH2AO75445 HMGB1P12-201ENST00000438594 598 ntBASIC0.92□□□□□ -2.26
USH2AO75445 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC0.92□□□□□ -2.26
USH2AO75445 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC0.92□□□□□ -2.26
USH2AO75445 RNU2-58P-201ENST00000516403 183 ntBASIC0.92□□□□□ -2.26
USH2AO75445 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC0.92□□□□□ -2.26
USH2AO75445 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC0.92□□□□□ -2.26
USH2AO75445 HMGN2P28-201ENST00000606102 262 ntBASIC0.92□□□□□ -2.26
USH2AO75445 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC0.92□□□□□ -2.26
USH2AO75445 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
USH2AO75445 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
USH2AO75445 MIR423-201ENST00000362201 94 ntBASIC0.92□□□□□ -2.26
USH2AO75445 Y_RNA.115-201ENST00000363272 98 ntBASIC0.92□□□□□ -2.26
USH2AO75445 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC0.92□□□□□ -2.26
USH2AO75445 RPS20P25-201ENST00000412447 352 ntBASIC0.92□□□□□ -2.26
USH2AO75445 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC0.92□□□□□ -2.26
USH2AO75445 AC105137.2-201ENST00000569073 466 ntBASIC0.92□□□□□ -2.26
USH2AO75445 MYL12BP1-201ENST00000569826 507 ntBASIC0.92□□□□□ -2.26
USH2AO75445 AL365503.1-201ENST00000605247 905 ntBASIC0.92□□□□□ -2.26
USH2AO75445 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC0.92□□□□□ -2.26
USH2AO75445 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC0.92□□□□□ -2.26
USH2AO75445 AC098657.3-201ENST00000620434 263 ntBASIC0.92□□□□□ -2.26
USH2AO75445 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC0.92□□□□□ -2.26
USH2AO75445 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC0.92□□□□□ -2.26
USH2AO75445 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC0.92□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms