Protein–RNA interactions for Protein: Q9HBJ7

USP29, Ubiquitin carboxyl-terminal hydrolase 29, humanhuman

Predictions only

Length 922 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP29Q9HBJ7 RPL31P1-201ENST00000398116 372 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 HSPD1P16-201ENST00000402302 394 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 MTCO1P17-201ENST00000411522 491 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 RPS3AP3-201ENST00000411933 242 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC108032.1-201ENST00000416706 207 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 RPL36AP36-201ENST00000418616 301 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 RPS15AP40-201ENST00000419621 391 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 MTCO2P5-201ENST00000422621 426 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC006011.1-201ENST00000442758 349 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 HSPE1P28-201ENST00000443139 211 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 snoU109.1-201ENST00000459339 135 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 PLGLA-201ENST00000465668 449 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC087385.1-201ENST00000475062 312 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC105252.1-201ENST00000503089 286 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC093767.1-201ENST00000504523 156 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC091133.4-201ENST00000511142 308 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 RNU7-143P-201ENST00000516781 65 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 PTP4A1P6-201ENST00000531034 478 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 EEF1B2P4-201ENST00000551398 348 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC087481.2-201ENST00000565492 330 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 RPL23AP87-202ENST00000573039 466 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 MIR4801-201ENST00000582704 82 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AL353997.4-201ENST00000586196 166 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC020914.4-201ENST00000597690 277 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AL390208.1-201ENST00000605885 644 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC007684.1-201ENST00000609671 477 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC105429.2-201ENST00000610567 517 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AP001506.1-201ENST00000615444 211 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AC103858.2-201ENST00000621471 543 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 AL161637.1-201ENST00000622380 412 ntBASIC4.23□□□□□ -1.73
USP29Q9HBJ7 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
USP29Q9HBJ7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 RN7SKP226-201ENST00000364912 300 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 RNU6-744P-201ENST00000365557 107 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 RNU6-1316P-201ENST00000384242 108 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 SNORA3C-201ENST00000408792 125 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AL358472.1-201ENST00000431295 329 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 MTATP6P13-201ENST00000438531 667 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 NPM1P49-201ENST00000448027 714 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AL162388.1-201ENST00000450912 352 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC098824.1-201ENST00000453565 980 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 Z82190.1-201ENST00000454534 490 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 ACTR3P3-201ENST00000480448 893 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AL358832.1-201ENST00000497800 389 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC146944.2-203ENST00000502493 354 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC139495.1-202ENST00000513164 354 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AP003122.4-201ENST00000530980 758 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 NTS-203ENST00000551529 801 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC136619.2-201ENST00000563361 631 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 TPRKBP2-201ENST00000565969 475 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 MIR4458-201ENST00000578872 75 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 MIR4286-201ENST00000580651 93 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 BNIP3P22-201ENST00000593399 556 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 BBIP1P1-201ENST00000602999 279 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AP003117.2-201ENST00000606010 545 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 AC126118.1-201ENST00000607744 628 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 MIR7151-201ENST00000617477 60 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 MIR4496-201ENST00000635896 61 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 MIR6715B-201ENST00000637172 77 ntBASIC4.22□□□□□ -1.73
USP29Q9HBJ7 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
USP29Q9HBJ7 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.7 ms