Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 AC011998.1-201ENST00000433403 117 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 AL031667.1-201ENST00000440222 725 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.91□□□□□ -1.78
NPAS1Q99742 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.91□□□□□ -1.78
NPAS1Q99742 MTND1P9-201ENST00000453775 944 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 MTCO3P20-201ENST00000454926 688 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.91□□□□□ -1.78
NPAS1Q99742 RN7SL481P-201ENST00000477764 299 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 AC012158.1-204ENST00000483430 465 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 AC026979.1-201ENST00000492525 396 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 AC108022.1-201ENST00000493466 478 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.91□□□□□ -1.78
NPAS1Q99742 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.91□□□□□ -1.78
NPAS1Q99742 AC006499.6-201ENST00000511169 607 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 IGKV1OR2-1-201ENST00000514060 354 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 MIR2114-201ENST00000516645 80 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 RNU2-46P-201ENST00000517038 113 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
NPAS1Q99742 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 AL133271.1-201ENST00000538229 291 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC3.91□□□□□ -1.78
NPAS1Q99742 AL352979.3-201ENST00000553515 247 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 AC009063.1-201ENST00000563342 702 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 DUXAP4-201ENST00000603046 613 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 HMGB1P50-201ENST00000605814 607 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 MIR6810-201ENST00000622701 70 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.91□□□□□ -1.78
NPAS1Q99742 PISRT1-201ENST00000626175 531 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC3.91□□□□□ -1.78
NPAS1Q99742 AC140479.6-201ENST00000633535 357 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 AC099654.13-201ENST00000639774 207 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 OR5BE1P-202ENST00000641168 1176 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 OR52H1-202ENST00000641796 1061 ntBASIC3.91□□□□□ -1.78
NPAS1Q99742 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS1Q99742 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS1Q99742 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS1Q99742 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
NPAS1Q99742 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
NPAS1Q99742 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
NPAS1Q99742 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.91□□□□□ -1.78
NPAS1Q99742 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPAS1Q99742 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPAS1Q99742 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
NPAS1Q99742 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
NPAS1Q99742 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
NPAS1Q99742 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
NPAS1Q99742 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC3.9□□□□□ -1.78
NPAS1Q99742 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC3.9□□□□□ -1.78
NPAS1Q99742 AC015813.6-201ENST00000624409 5808 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.9□□□□□ -1.79
NPAS1Q99742 AC067945.1-201ENST00000342609 618 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NPAS1Q99742 Y_RNA.296-201ENST00000364930 108 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 RNA5SP22-201ENST00000365393 109 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 MIR1183-201ENST00000408856 89 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AMD1P2-201ENST00000412936 992 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 OR1AA1P-201ENST00000419597 916 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AL157831.1-201ENST00000426134 473 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AL589872.1-201ENST00000426602 288 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 FTH1P6-201ENST00000430768 320 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.9□□□□□ -1.79
NPAS1Q99742 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.9□□□□□ -1.79
NPAS1Q99742 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS1Q99742 HLA-N-201ENST00000437516 135 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 PGBD4P3-201ENST00000440731 581 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 MTCYBP1-201ENST00000454315 1119 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC079804.1-201ENST00000461922 436 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 SRRM1P2-201ENST00000464531 1192 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
NPAS1Q99742 AC011825.1-201ENST00000484967 388 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC055855.1-201ENST00000489563 579 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC093278.1-201ENST00000494700 600 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC096751.1-202ENST00000502691 1067 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC107401.1-201ENST00000503426 685 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC3.9□□□□□ -1.79
NPAS1Q99742 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.9□□□□□ -1.79
NPAS1Q99742 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.9□□□□□ -1.79
NPAS1Q99742 AC015795.1-201ENST00000513669 327 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 RNU6-1095P-201ENST00000516148 108 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 RNA5SP49-201ENST00000516450 115 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 RNA5SP519-201ENST00000516480 119 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC3.9□□□□□ -1.79
NPAS1Q99742 IFITM8P-201ENST00000522529 394 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.9□□□□□ -1.79
NPAS1Q99742 AP003122.4-201ENST00000530980 758 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC3.9□□□□□ -1.79
NPAS1Q99742 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
NPAS1Q99742 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.9□□□□□ -1.79
NPAS1Q99742 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.9□□□□□ -1.79
NPAS1Q99742 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.9□□□□□ -1.79
NPAS1Q99742 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.9□□□□□ -1.79
NPAS1Q99742 UBE2L4-201ENST00000587688 464 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.9□□□□□ -1.79
NPAS1Q99742 XIAPP1-201ENST00000603162 600 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC006254.3-201ENST00000603353 884 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC108747.1-201ENST00000609508 535 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AL355472.4-201ENST00000610233 626 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 BX664608.1-201ENST00000610519 487 ntBASIC3.9□□□□□ -1.79
NPAS1Q99742 AC087241.4-201ENST00000612441 480 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 145.3 ms