Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD1Q8NHV4 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
NEDD1Q8NHV4 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 Y_RNA.214-201ENST00000364201 112 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 RNU6-593P-201ENST00000364716 112 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 RNU6-39P-201ENST00000384344 107 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AL078604.1-201ENST00000404609 466 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 SNORA77-201ENST00000408716 125 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 RNU2-23P-201ENST00000410545 195 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AL591848.1-201ENST00000413092 322 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 OR2AM1P-201ENST00000422137 422 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC073910.1-201ENST00000445047 438 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AL353752.1-201ENST00000454946 260 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC090602.1-201ENST00000469695 252 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC140172.1-201ENST00000502928 141 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC114801.2-201ENST00000503825 781 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 HIGD1AP6-201ENST00000521833 279 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC068993.1-201ENST00000546724 589 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 RPL21P7-201ENST00000557463 483 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC011487.3-201ENST00000593607 453 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC010620.2-201ENST00000600135 313 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AL355365.1-201ENST00000616480 294 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AC087385.3-201ENST00000620477 187 ntBASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
NEDD1Q8NHV4 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC097504.1-201ENST00000515103 2415 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 RNU6-545P-201ENST00000362681 104 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 RNU6-806P-201ENST00000365147 105 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 RNU6-338P-201ENST00000383888 105 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 RNU6-532P-201ENST00000384318 107 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 Y_RNA.478-201ENST00000384358 107 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 Y_RNA.539-201ENST00000384635 107 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC234781.4-201ENST00000419384 244 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 PDSS1P1-201ENST00000422953 1114 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 COX6CP13-201ENST00000428703 226 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AL031663.1-201ENST00000437445 219 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 IGKV1OR-3-201ENST00000446944 348 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC004980.3-201ENST00000447046 365 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC002381.1-201ENST00000447049 280 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 RPS20P32-201ENST00000456044 356 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC090686.1-201ENST00000481577 749 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC011005.2-201ENST00000487324 359 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 RN7SL441P-201ENST00000492388 296 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 HIGD1AP13-201ENST00000509878 289 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AP006245.2-201ENST00000522004 300 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 MIR4775-201ENST00000581168 75 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC105224.1-201ENST00000587055 421 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC012433.1-201ENST00000588916 398 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 Mico1.1-201ENST00000611698 204 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC091925.2-201ENST00000625059 256 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AL606534.2-204ENST00000635008 178 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 SMG1P7-201ENST00000565246 2704 ntBASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
NEDD1Q8NHV4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD1Q8NHV4 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
NEDD1Q8NHV4 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD1Q8NHV4 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD1Q8NHV4 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
NEDD1Q8NHV4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD1Q8NHV4 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
NEDD1Q8NHV4 Y_RNA.20-201ENST00000362479 113 ntBASIC5.92□□□□□ -1.46
NEDD1Q8NHV4 RNU6-744P-201ENST00000365557 107 ntBASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms