Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.22□□□□□ -2.05
ZNF439Q8NDP4 AC079600.2-201ENST00000550076 130 ntBASIC2.22□□□□□ -2.05
ZNF439Q8NDP4 AL442163.2-201ENST00000553912 710 ntBASIC2.22□□□□□ -2.05
ZNF439Q8NDP4 AC074050.1-201ENST00000563247 211 ntBASIC2.22□□□□□ -2.05
ZNF439Q8NDP4 AC090616.3-201ENST00000582184 217 ntBASIC2.22□□□□□ -2.05
ZNF439Q8NDP4 DUXAP3-201ENST00000603616 594 ntBASIC2.22□□□□□ -2.05
ZNF439Q8NDP4 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC2.22□□□□□ -2.05
ZNF439Q8NDP4 CR381572.1-201ENST00000625098 102 ntBASIC2.22□□□□□ -2.05
ZNF439Q8NDP4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.22□□□□□ -2.05
ZNF439Q8NDP4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 RNU6-989P-201ENST00000362756 107 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 SET-203ENST00000372688 801 ntTSL 2 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 SNORA9-201ENST00000384215 133 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC096632.1-201ENST00000427395 310 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC079780.1-201ENST00000428259 207 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC087499.2-201ENST00000432861 149 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 SNRPGP6-201ENST00000451124 220 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AP001804.3-201ENST00000525146 880 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 GTF2IP8-201ENST00000560687 584 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC093536.2-201ENST00000565257 1406 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 BNIP3P22-201ENST00000593399 556 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 AC245517.5-201ENST00000611529 162 ntBASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC2.21□□□□□ -2.06
ZNF439Q8NDP4 TAB3P1-202ENST00000452645 1634 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AL512646.1-201ENST00000269395 1077 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 RNA5SP387-201ENST00000364226 106 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 RNU1-138P-201ENST00000384093 164 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 RNU6-339P-201ENST00000384310 107 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 MIR491-201ENST00000384877 84 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 MIR128-1-201ENST00000384921 82 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 MIR592-201ENST00000384959 97 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AL356320.2-201ENST00000417263 507 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AC114973.1-201ENST00000429057 632 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 SUMO1P4-201ENST00000429430 302 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 TRIM60P8Y-201ENST00000436338 762 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 RPS24P13-201ENST00000442520 397 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 RAD1P2-201ENST00000446414 663 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AP000867.2-201ENST00000532468 320 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AC092470.1-201ENST00000546187 132 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 EIF5A2P1-201ENST00000564027 460 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AC103810.1-201ENST00000579873 453 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AL049779.4-201ENST00000604500 156 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 BX649567.1-201ENST00000642071 1134 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 AP000526.1-201ENST00000603308 1388 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 ZNF833P-201ENST00000424938 1494 ntBASIC2.2□□□□□ -2.06
ZNF439Q8NDP4 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 SNORA25.6-201ENST00000364121 118 ntBASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 Y_RNA.333-201ENST00000365274 102 ntBASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 MIR9-1-201ENST00000385198 89 ntBASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 RPL7P30-201ENST00000420888 709 ntBASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.19□□□□□ -2.06
ZNF439Q8NDP4 OR51B8P-201ENST00000449892 769 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms