Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 OR5H2-201ENST00000355273 945 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 U3.11-201ENST00000364476 212 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 USP9YP33-201ENST00000412220 421 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC016712.1-201ENST00000431088 378 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 USP9YP35-201ENST00000435696 412 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 HMGB1P12-201ENST00000438594 598 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 EEF1E1P1-201ENST00000446998 430 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 SUMO2P2-201ENST00000456482 255 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 HMGN2P16-201ENST00000456802 261 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AL139824.2-201ENST00000458731 1095 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 snoU109.4-201ENST00000458953 143 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 snoU13.24-201ENST00000458998 104 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AP001992.1-205ENST00000462248 379 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC147055.4-201ENST00000504399 745 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC108064.1-201ENST00000513791 460 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 MTCO1P35-201ENST00000515270 228 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC009094.1-201ENST00000564443 426 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC012146.1-204ENST00000570712 426 ntTSL 3 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC012669.1-201ENST00000603209 283 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 AC080013.4-201ENST00000607624 649 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.48□□□□□ -1.85
CCDC63Q8NA47 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.48□□□□□ -1.85
CCDC63Q8NA47 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC244517.1-201ENST00000606030 2086 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AL022578.1-201ENST00000439330 1433 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RPL23AP57-201ENST00000332361 466 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RPL7P26-201ENST00000333817 754 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 FRG1CP-201ENST00000358464 769 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RNU6-931P-201ENST00000363850 107 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 SNORA4.1-201ENST00000364263 144 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RNU6-1181P-201ENST00000384191 106 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RNU6-952P-201ENST00000391164 108 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC119751.3-201ENST00000399720 670 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RNU2-71P-201ENST00000411395 189 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RPL7P30-201ENST00000420888 709 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC010099.3-201ENST00000423896 409 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RPL21P66-201ENST00000426566 466 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 TRIM60P9Y-201ENST00000438459 816 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 TRIM60P18-201ENST00000441518 828 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 TRIM60P11Y-201ENST00000445313 801 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 USP9YP10-201ENST00000454868 628 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC007967.1-201ENST00000455422 1159 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AL133162.1-201ENST00000463228 453 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RPL21P104-201ENST00000464143 478 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RPL31P50-201ENST00000471002 296 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RNU6-150P-201ENST00000516237 95 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 RGS5-218ENST00000526176 574 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC024224.1-201ENST00000538284 609 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 OR4T1P-201ENST00000554933 911 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AC006338.2-201ENST00000616864 791 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AL136981.2-201ENST00000617319 734 ntBASIC3.47□□□□□ -1.85
CCDC63Q8NA47 PACRG-211ENST00000621363 360 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.47□□□□□ -1.85
CCDC63Q8NA47 AL049780.3-201ENST00000624612 1583 ntBASIC3.46□□□□□ -1.85
CCDC63Q8NA47 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.46□□□□□ -1.85
CCDC63Q8NA47 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
CCDC63Q8NA47 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
CCDC63Q8NA47 AC097714.1-201ENST00000511272 1647 ntBASIC3.46□□□□□ -1.86
CCDC63Q8NA47 RPL32P3-201ENST00000359025 275 ntBASIC3.46□□□□□ -1.86
CCDC63Q8NA47 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC63Q8NA47 RNU6-712P-201ENST00000410558 100 ntBASIC3.46□□□□□ -1.86
CCDC63Q8NA47 RN7SKP53-201ENST00000411337 315 ntBASIC3.46□□□□□ -1.86
CCDC63Q8NA47 NDUFB4P5-201ENST00000415445 361 ntBASIC3.46□□□□□ -1.86
CCDC63Q8NA47 CRYBB2P1-203ENST00000415709 538 ntBASIC3.46□□□□□ -1.86
CCDC63Q8NA47 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC63Q8NA47 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.46□□□□□ -1.86
CCDC63Q8NA47 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.46□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms