Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 AC245100.2-201ENST00000454544 1679 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
ATG4DQ86TL0 C4BPAP1-201ENST00000415474 1893 ntBASIC4.86□□□□□ -1.63
ATG4DQ86TL0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 GVINP1-202ENST00000531871 7271 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.39-201ENST00000362620 98 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.64-201ENST00000362845 102 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 RNA5SP335-201ENST00000363817 110 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 CLDN10-202ENST00000376855 701 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 U3.20-201ENST00000390909 217 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 RNU6-1093P-201ENST00000391194 107 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC114491.1-201ENST00000416095 246 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AL139095.3-201ENST00000419672 1203 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 ELOCP20-201ENST00000422460 345 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 RPL12P18-201ENST00000437175 325 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 CYCSP12-201ENST00000437729 300 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AL121871.1-201ENST00000443413 436 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 HMGB3P21-201ENST00000452483 547 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC005008.1-201ENST00000456151 612 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC079804.1-201ENST00000461922 436 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 RNA5SP34-201ENST00000516887 130 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 OR5D17P-201ENST00000531492 978 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 SETP7-201ENST00000552169 453 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 Z98751.3-201ENST00000604447 521 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 HMGB1P50-201ENST00000605814 607 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AL049794.2-201ENST00000616301 365 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AC025034.2-201ENST00000623264 286 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 AP000843.1-201ENST00000624880 701 ntBASIC4.85□□□□□ -1.63
ATG4DQ86TL0 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
ATG4DQ86TL0 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.2-201ENST00000362330 96 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 RNU6-1287P-201ENST00000362914 107 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.214-201ENST00000364201 112 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.234-201ENST00000364409 97 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 Y_RNA.270-201ENST00000364693 104 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 SNORD14.1-201ENST00000365609 90 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 RNU6-306P-201ENST00000384617 107 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 RNU6-1060P-201ENST00000384664 107 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 RNA5SP487-201ENST00000410186 122 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AL133384.1-201ENST00000412744 351 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 RPL31P45-201ENST00000419532 356 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 FTLP19-201ENST00000433300 394 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 CYCSP6-201ENST00000434498 302 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AC133473.1-201ENST00000455173 299 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 SCARNA18-201ENST00000459004 134 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 RPS23P3-201ENST00000470993 430 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AC022133.1-201ENST00000490961 571 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AC016559.2-201ENST00000510759 359 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 BX510359.5-201ENST00000515651 304 ntBASIC4.84□□□□□ -1.63
ATG4DQ86TL0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.84□□□□□ -1.63
ATG4DQ86TL0 AC027369.5-201ENST00000533838 755 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms