Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 Z69720.2-201ENST00000624755 279 ntBASIC5.72□□□□□ -1.49
COL13A1Q5TAT6 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC5.72□□□□□ -1.49
COL13A1Q5TAT6 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL13A1Q5TAT6 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.72□□□□□ -1.49
COL13A1Q5TAT6 AC025031.4-201ENST00000621248 3271 ntBASIC5.72□□□□□ -1.49
COL13A1Q5TAT6 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL13A1Q5TAT6 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
COL13A1Q5TAT6 RAD17P1-201ENST00000418130 2042 ntBASIC5.72□□□□□ -1.49
COL13A1Q5TAT6 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.49
COL13A1Q5TAT6 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
COL13A1Q5TAT6 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
COL13A1Q5TAT6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 RNU6-179P-201ENST00000363350 107 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 RNU6-511P-201ENST00000363496 107 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 U3.10-201ENST00000364459 214 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 RNU6-702P-201ENST00000364982 107 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 Y_RNA.378-201ENST00000365652 113 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 RNU6-1032P-201ENST00000384100 107 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 RNU6-1226P-201ENST00000384317 107 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 SNORA70.9-201ENST00000384370 135 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 RNA5SP397-201ENST00000391323 118 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 RNU6-1304P-201ENST00000411374 106 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 VDAC1P9-201ENST00000412766 841 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 UBE2Q2P12-201ENST00000414573 204 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 Z98949.2-201ENST00000440996 144 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC079140.5-201ENST00000507882 310 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 MRPS35P2-201ENST00000508242 191 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 RNU6-273P-201ENST00000516937 96 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 HMGB1P41-201ENST00000520234 440 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC023442.1-201ENST00000531247 422 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AL137161.1-201ENST00000532231 390 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AL670379.11-201ENST00000604059 253 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AL670379.10-201ENST00000604330 253 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AL670379.12-201ENST00000605291 253 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AL670379.9-201ENST00000605428 253 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC098657.3-201ENST00000620434 263 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC012442.3-202ENST00000636742 206 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 Z95114.1-201ENST00000624264 14574 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 AC073346.2-201ENST00000624724 2058 ntBASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
COL13A1Q5TAT6 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 GNG5P2-201ENST00000372054 207 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AL360182.1-201ENST00000397433 468 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 RPL23AP17-201ENST00000401064 499 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 SSXP10-201ENST00000402595 565 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC069218.2-201ENST00000411665 344 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC015977.1-201ENST00000418887 292 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 ATG3P1-201ENST00000419507 911 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 RPL31P12-201ENST00000422587 358 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 RAC1P7-201ENST00000445367 377 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 RPL23AP43-201ENST00000446445 471 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 MRPS31P2-201ENST00000451581 518 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 RNU7-59P-201ENST00000459101 61 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AL139099.1-201ENST00000497398 403 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC068305.1-201ENST00000497406 726 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 RPS27P27-201ENST00000498779 255 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC146944.2-203ENST00000502493 354 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC010350.1-201ENST00000504908 231 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC093815.1-201ENST00000508637 280 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC139495.1-202ENST00000513164 354 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 RNU6-256P-201ENST00000516747 97 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC090136.1-201ENST00000520009 240 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AL161670.1-201ENST00000554348 137 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC008269.2-201ENST00000561915 1105 ntBASIC5.7□□□□□ -1.5
COL13A1Q5TAT6 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms