Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.79□□□□□ -1.96
RFX7Q2KHR2 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AC004022.2-201ENST00000413824 193 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AL591806.2-201ENST00000433122 173 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AC096638.1-201ENST00000444678 216 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AC027673.1-201ENST00000456245 405 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AP002371.1-201ENST00000463604 433 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 PDCD10-216ENST00000492396 814 ntTSL 5 BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 IGKV2-36-201ENST00000519999 223 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 OR4R2P-201ENST00000530815 597 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AC087241.2-201ENST00000535801 324 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AL442163.2-201ENST00000553912 710 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 DUXAP4-201ENST00000603046 613 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AC073387.2-201ENST00000604797 784 ntBASIC2.78□□□□□ -1.96
RFX7Q2KHR2 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
RFX7Q2KHR2 AL136520.1-201ENST00000600311 1322 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RFX7Q2KHR2 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.77□□□□□ -1.97
RFX7Q2KHR2 RNA5SP492-201ENST00000411330 114 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 AC009961.3-201ENST00000449832 765 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 AC004263.1-201ENST00000479327 332 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 AL024509.2-201ENST00000493462 493 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC2.77□□□□□ -1.97
RFX7Q2KHR2 AC092436.1-201ENST00000506450 503 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 HSPE1P20-201ENST00000538133 289 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.77□□□□□ -1.97
RFX7Q2KHR2 SETP2-201ENST00000553886 926 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 AC015712.3-201ENST00000559380 164 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.77□□□□□ -1.97
RFX7Q2KHR2 AL137847.3-201ENST00000611521 109 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.77□□□□□ -1.97
RFX7Q2KHR2 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC2.77□□□□□ -1.97
RFX7Q2KHR2 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
RFX7Q2KHR2 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RFX7Q2KHR2 CNOT6LP1-201ENST00000559681 1462 ntBASIC2.77□□□□□ -1.97
RFX7Q2KHR2 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 LSM5-205ENST00000409952 687 ntTSL 4 BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 RNA5SP181-201ENST00000410246 98 ntBASIC2.76□□□□□ -1.97
RFX7Q2KHR2 RNU4-26P-201ENST00000410270 107 ntBASIC2.76□□□□□ -1.97
RFX7Q2KHR2 AC007064.1-201ENST00000412238 351 ntBASIC2.76□□□□□ -1.97
RFX7Q2KHR2 AL031736.2-201ENST00000426573 787 ntBASIC2.76□□□□□ -1.97
RFX7Q2KHR2 MTATP6P11-201ENST00000428071 670 ntBASIC2.76□□□□□ -1.97
RFX7Q2KHR2 RPS15AP28-201ENST00000435088 386 ntBASIC2.76□□□□□ -1.97
RFX7Q2KHR2 AC108210.2-201ENST00000503681 201 ntBASIC2.76□□□□□ -1.97
RFX7Q2KHR2 AL592494.3-201ENST00000609485 464 ntBASIC2.76□□□□□ -1.97
RFX7Q2KHR2 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.76□□□□□ -1.97
RFX7Q2KHR2 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 RNU1-138P-201ENST00000384093 164 ntBASIC2.75□□□□□ -1.97
RFX7Q2KHR2 SNORA81-201ENST00000408493 178 ntBASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 RPL30P11-201ENST00000495304 339 ntBASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AC098799.2-201ENST00000509466 868 ntBASIC2.75□□□□□ -1.97
RFX7Q2KHR2 NPM1P52-201ENST00000518264 846 ntBASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AADACP1-206ENST00000561502 1193 ntBASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AL392112.1-201ENST00000605115 829 ntBASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AC116563.2-201ENST00000624751 535 ntBASIC2.75□□□□□ -1.97
RFX7Q2KHR2 AL160394.1-201ENST00000624765 724 ntBASIC2.75□□□□□ -1.97
RFX7Q2KHR2 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.75□□□□□ -1.97
RFX7Q2KHR2 RPL21P75-201ENST00000396599 483 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RPL21P28-201ENST00000401418 483 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AL592114.1-201ENST00000403842 483 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RPL19P1-201ENST00000411635 428 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AL096701.2-201ENST00000416920 238 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 CR769767.1-201ENST00000436337 346 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RPL21P39-201ENST00000463605 483 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC011979.1-201ENST00000472300 483 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RPS4XP6-201ENST00000477670 797 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 RPL21P93-201ENST00000480465 489 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC233702.1-201ENST00000482905 502 ntBASIC2.74□□□□□ -1.97
RFX7Q2KHR2 AC087190.1-201ENST00000484462 480 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms