Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC093732.2-201ENST00000607950 274 ntBASIC2□□□□□ -2.09
HIST1H1AQ02539 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
HIST1H1AQ02539 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HIST1H1AQ02539 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
HIST1H1AQ02539 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2□□□□□ -2.09
HIST1H1AQ02539 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC109315.1-201ENST00000584143 1347 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 GNG5P1-201ENST00000255500 204 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 MIR142-201ENST00000384835 87 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 MORF4L1P6-201ENST00000418771 268 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 OFD1P18Y-201ENST00000420889 959 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC112220.1-201ENST00000434628 355 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 RPS12P2-201ENST00000439728 269 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AL645638.1-201ENST00000440519 361 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 RPL23AP31-201ENST00000456160 467 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 NAP1L1P3-201ENST00000462291 880 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC090543.1-201ENST00000492168 485 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC026427.2-201ENST00000506228 536 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 HIGD1AP13-201ENST00000509878 289 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC107222.1-201ENST00000510899 637 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 MTCYBP28-201ENST00000566728 1132 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AL136363.1-201ENST00000605349 337 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AC135803.1-201ENST00000608748 565 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 MIR203B-201ENST00000636080 86 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AL365361.1-201ENST00000566942 3481 ntBASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
HIST1H1AQ02539 AP000526.1-201ENST00000603308 1388 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AL512646.1-201ENST00000269395 1077 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 RNU6-263P-201ENST00000363811 107 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 RNU6-374P-201ENST00000364146 108 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 SNORA44-201ENST00000384584 132 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 MIR524-201ENST00000385242 87 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 MT-TC-201ENST00000387405 66 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 RNA5SP21-201ENST00000410917 96 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AF274854.1-201ENST00000413236 615 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AL356320.2-201ENST00000417263 507 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 USP9YP27-201ENST00000418455 438 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 ACTR3BP6-201ENST00000422332 1241 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AC114973.1-201ENST00000429057 632 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 ARL5AP3-201ENST00000439327 386 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AL135938.1-201ENST00000443141 297 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 IGKV1OR-3-201ENST00000446944 348 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 RPS4XP6-201ENST00000477670 797 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 IGKV2D-36-201ENST00000518643 226 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 OR5BN1P-201ENST00000532955 829 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 CYCSP39-201ENST00000565821 309 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 ISCA1P3-201ENST00000577104 373 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 RPL23AP92-201ENST00000603609 255 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AC079597.1-201ENST00000624306 508 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AL137790.1-201ENST00000634283 177 ntBASIC1.98□□□□□ -2.09
HIST1H1AQ02539 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
HIST1H1AQ02539 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 FRG1BP-201ENST00000278882 761 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 RNU1-112P-201ENST00000364401 164 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 RNF2P1-201ENST00000442955 1010 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 RNF138P1-201ENST00000502765 546 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 SLC25A15P5-201ENST00000508033 253 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.97□□□□□ -2.09
HIST1H1AQ02539 OR5BM1P-201ENST00000512021 366 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 AC123904.3-201ENST00000547218 814 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 CR383656.14-201ENST00000551951 406 ntBASIC1.97□□□□□ -2.09
HIST1H1AQ02539 GTF2IP8-201ENST00000560687 584 ntBASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms