Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNU6-1193P-201ENST00000459461 107 ntBASIC1.26□□□□□ -2.21
RPL39P62891 RPL21P99-201ENST00000480369 423 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AC090453.1-201ENST00000495560 436 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.26□□□□□ -2.21
RPL39P62891 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC1.26□□□□□ -2.21
RPL39P62891 CDC42P4-201ENST00000510507 563 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AC006499.2-201ENST00000513470 337 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL39P62891 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL39P62891 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL39P62891 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL39P62891 AP002812.4-201ENST00000532139 286 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL39P62891 AC009063.1-201ENST00000563342 702 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC1.26□□□□□ -2.21
RPL39P62891 RNU6-368P-201ENST00000620928 107 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AC006249.1-201ENST00000621223 471 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AC012150.2-201ENST00000621300 544 ntBASIC1.26□□□□□ -2.21
RPL39P62891 RNU6-538P-201ENST00000622329 107 ntBASIC1.26□□□□□ -2.21
RPL39P62891 CFTRP2-201ENST00000634304 199 ntBASIC1.26□□□□□ -2.21
RPL39P62891 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC1.26□□□□□ -2.21
RPL39P62891 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.26□□□□□ -2.21
RPL39P62891 AC063923.1-201ENST00000478982 1619 ntBASIC1.26□□□□□ -2.21
RPL39P62891 AL512646.1-201ENST00000269395 1077 ntBASIC1.25□□□□□ -2.21
RPL39P62891 SNORA70.4-201ENST00000365509 134 ntBASIC1.25□□□□□ -2.21
RPL39P62891 RNU1-52P-201ENST00000384190 164 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.25□□□□□ -2.21
RPL39P62891 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC1.25□□□□□ -2.21
RPL39P62891 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL39P62891 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.25□□□□□ -2.21
RPL39P62891 AC092013.1-201ENST00000438795 332 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.25□□□□□ -2.21
RPL39P62891 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.25□□□□□ -2.21
RPL39P62891 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL39P62891 AL354710.1-201ENST00000453641 246 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.25□□□□□ -2.21
RPL39P62891 NFU1-207ENST00000462320 558 ntTSL 4 BASIC1.25□□□□□ -2.21
RPL39P62891 RPL21P104-201ENST00000464143 478 ntBASIC1.25□□□□□ -2.21
RPL39P62891 HSPE1P6-201ENST00000479457 291 ntBASIC1.25□□□□□ -2.21
RPL39P62891 RPS27P21-201ENST00000486977 252 ntBASIC1.25□□□□□ -2.21
RPL39P62891 RPL9P6-201ENST00000492764 598 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AC034222.1-201ENST00000494052 532 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL39P62891 HMGB1P47-201ENST00000511281 589 ntBASIC1.25□□□□□ -2.21
RPL39P62891 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
RPL39P62891 MIR514B-201ENST00000516774 80 ntBASIC1.25□□□□□ -2.21
RPL39P62891 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC1.25□□□□□ -2.21
RPL39P62891 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
RPL39P62891 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.25□□□□□ -2.21
RPL39P62891 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC1.25□□□□□ -2.21
RPL39P62891 AL138976.2-201ENST00000563989 694 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.25□□□□□ -2.21
RPL39P62891 AMZ2P1-203ENST00000565833 850 ntBASIC1.25□□□□□ -2.21
RPL39P62891 BDH2P1-201ENST00000602288 736 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AL137843.1-201ENST00000605078 385 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AP004247.3-201ENST00000608682 624 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AC009090.3-201ENST00000616553 565 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AC091046.2-201ENST00000620775 665 ntBASIC1.25□□□□□ -2.21
RPL39P62891 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC1.25□□□□□ -2.21
RPL39P62891 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC1.24□□□□□ -2.21
RPL39P62891 AC046144.1-201ENST00000478559 1853 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AP002907.1-201ENST00000606361 1430 ntBASIC1.24□□□□□ -2.21
RPL39P62891 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.24□□□□□ -2.21
RPL39P62891 AL450338.1-201ENST00000407987 512 ntBASIC1.24□□□□□ -2.21
RPL39P62891 RPL26P37-201ENST00000411983 438 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC1.24□□□□□ -2.21
RPL39P62891 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC1.24□□□□□ -2.21
RPL39P62891 AL356320.1-201ENST00000429616 163 ntBASIC1.24□□□□□ -2.21
RPL39P62891 Z98742.2-201ENST00000431564 187 ntBASIC1.24□□□□□ -2.21
RPL39P62891 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.24□□□□□ -2.21
RPL39P62891 AC004866.2-201ENST00000438285 481 ntBASIC1.24□□□□□ -2.21
RPL39P62891 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
RPL39P62891 AC003989.2-201ENST00000440224 169 ntBASIC1.24□□□□□ -2.21
RPL39P62891 XKRY2-201ENST00000442362 1093 ntBASIC1.24□□□□□ -2.21
RPL39P62891 USP9YP15-201ENST00000442391 422 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AL121871.1-201ENST00000443413 436 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.24□□□□□ -2.21
RPL39P62891 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL39P62891 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL39P62891 SSXP4-201ENST00000451349 245 ntBASIC1.24□□□□□ -2.21
RPL39P62891 BZW1P2-201ENST00000473537 826 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC1.24□□□□□ -2.21
RPL39P62891 AC106872.3-201ENST00000495104 446 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL39P62891 RNU2-44P-201ENST00000516795 194 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL39P62891 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.24□□□□□ -2.21
RPL39P62891 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC1.24□□□□□ -2.21
RPL39P62891 AC007375.1-201ENST00000554513 578 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL39P62891 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.24□□□□□ -2.21
RPL39P62891 MIR3162-201ENST00000581818 82 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AC010928.2-201ENST00000588017 287 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AL109653.1-201ENST00000603091 248 ntBASIC1.24□□□□□ -2.21
RPL39P62891 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC1.24□□□□□ -2.21
RPL39P62891 MIR203B-201ENST00000636080 86 ntBASIC1.24□□□□□ -2.21
RPL39P62891 AC233263.6-201ENST00000631132 1963 ntBASIC1.24□□□□□ -2.21
RPL39P62891 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC1.24□□□□□ -2.21
RPL39P62891 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.24□□□□□ -2.21
RPL39P62891 AC138915.1-201ENST00000565427 1685 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms