Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.19□□□□□ -2.06
CENPFP49454 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.19□□□□□ -2.06
CENPFP49454 API5P2-201ENST00000397055 1498 ntBASIC2.18□□□□□ -2.06
CENPFP49454 SNORA48.3-201ENST00000391081 134 ntBASIC2.18□□□□□ -2.06
CENPFP49454 AC012498.1-201ENST00000424037 437 ntBASIC2.18□□□□□ -2.06
CENPFP49454 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC2.18□□□□□ -2.06
CENPFP49454 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.18□□□□□ -2.06
CENPFP49454 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.18□□□□□ -2.06
CENPFP49454 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC2.18□□□□□ -2.06
CENPFP49454 AC025260.1-201ENST00000548858 430 ntBASIC2.18□□□□□ -2.06
CENPFP49454 AL356280.1-201ENST00000603614 379 ntBASIC2.18□□□□□ -2.06
CENPFP49454 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC2.18□□□□□ -2.06
CENPFP49454 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.18□□□□□ -2.06
CENPFP49454 DCAF13P1-201ENST00000495256 1330 ntBASIC2.18□□□□□ -2.06
CENPFP49454 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
CENPFP49454 GSTA12P-201ENST00000402398 508 ntBASIC2.18□□□□□ -2.06
CENPFP49454 UBE2V1P5-201ENST00000440070 405 ntBASIC2.18□□□□□ -2.06
CENPFP49454 RN7SKP40-201ENST00000517211 242 ntBASIC2.18□□□□□ -2.06
CENPFP49454 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.18□□□□□ -2.06
CENPFP49454 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC2.18□□□□□ -2.06
CENPFP49454 AC073387.2-201ENST00000604797 784 ntBASIC2.18□□□□□ -2.06
CENPFP49454 MTND5P35-201ENST00000557537 1720 ntBASIC2.18□□□□□ -2.06
CENPFP49454 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CENPFP49454 RNU1-51P-201ENST00000365345 176 ntBASIC2.17□□□□□ -2.06
CENPFP49454 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.17□□□□□ -2.06
CENPFP49454 RPL36AP33-201ENST00000450395 310 ntBASIC2.17□□□□□ -2.06
CENPFP49454 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC2.17□□□□□ -2.06
CENPFP49454 AL512598.1-201ENST00000610158 273 ntBASIC2.17□□□□□ -2.06
CENPFP49454 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.17□□□□□ -2.06
CENPFP49454 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CENPFP49454 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC2.17□□□□□ -2.06
CENPFP49454 MIR96-201ENST00000362288 78 ntBASIC2.17□□□□□ -2.06
CENPFP49454 ERHP2-201ENST00000402323 299 ntBASIC2.17□□□□□ -2.06
CENPFP49454 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.17□□□□□ -2.06
CENPFP49454 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.17□□□□□ -2.06
CENPFP49454 HMGN2P28-201ENST00000606102 262 ntBASIC2.17□□□□□ -2.06
CENPFP49454 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
CENPFP49454 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CENPFP49454 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.17□□□□□ -2.06
CENPFP49454 SNORD21-201ENST00000383953 95 ntBASIC2.17□□□□□ -2.06
CENPFP49454 RPS3AP9-201ENST00000417027 792 ntBASIC2.17□□□□□ -2.06
CENPFP49454 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.17□□□□□ -2.06
CENPFP49454 YWHAZP7-201ENST00000436906 631 ntBASIC2.17□□□□□ -2.06
CENPFP49454 LAMTOR5P1-201ENST00000444290 270 ntBASIC2.17□□□□□ -2.06
CENPFP49454 TOMM22P6-201ENST00000465035 409 ntBASIC2.17□□□□□ -2.06
CENPFP49454 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC2.17□□□□□ -2.06
CENPFP49454 RNA5SP102-201ENST00000516865 106 ntBASIC2.17□□□□□ -2.06
CENPFP49454 AC068790.3-201ENST00000602988 553 ntBASIC2.17□□□□□ -2.06
CENPFP49454 AC103988.1-201ENST00000566382 2177 ntBASIC2.16□□□□□ -2.06
CENPFP49454 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
CENPFP49454 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.16□□□□□ -2.06
CENPFP49454 USP9YP8-201ENST00000441913 500 ntBASIC2.16□□□□□ -2.06
CENPFP49454 CBWD4P-201ENST00000445695 655 ntBASIC2.16□□□□□ -2.06
CENPFP49454 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC2.16□□□□□ -2.06
CENPFP49454 RNU1-123P-201ENST00000458950 160 ntBASIC2.16□□□□□ -2.06
CENPFP49454 AC011352.3-201ENST00000505162 593 ntBASIC2.16□□□□□ -2.06
CENPFP49454 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC2.16□□□□□ -2.06
CENPFP49454 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.16□□□□□ -2.06
CENPFP49454 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC2.16□□□□□ -2.06
CENPFP49454 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.16□□□□□ -2.06
CENPFP49454 VN1R31P-201ENST00000417498 730 ntBASIC2.16□□□□□ -2.06
CENPFP49454 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.16□□□□□ -2.06
CENPFP49454 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC2.16□□□□□ -2.06
CENPFP49454 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.16□□□□□ -2.06
CENPFP49454 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC2.16□□□□□ -2.06
CENPFP49454 AC120053.1-201ENST00000607706 736 ntBASIC2.16□□□□□ -2.06
CENPFP49454 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CENPFP49454 CDC27P2-201ENST00000425026 1922 ntBASIC2.16□□□□□ -2.06
CENPFP49454 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.15□□□□□ -2.06
CENPFP49454 RPL23AP39-201ENST00000415533 405 ntBASIC2.15□□□□□ -2.06
CENPFP49454 IGKV2D-36-201ENST00000518643 226 ntBASIC2.15□□□□□ -2.06
CENPFP49454 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CENPFP49454 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.15□□□□□ -2.06
CENPFP49454 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.15□□□□□ -2.06
CENPFP49454 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.15□□□□□ -2.06
CENPFP49454 SSXP1-201ENST00000453640 473 ntBASIC2.15□□□□□ -2.07
CENPFP49454 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC2.15□□□□□ -2.07
CENPFP49454 CBX3P4-201ENST00000538909 354 ntBASIC2.15□□□□□ -2.07
CENPFP49454 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.15□□□□□ -2.07
CENPFP49454 AC005951.1-201ENST00000576706 485 ntBASIC2.15□□□□□ -2.07
CENPFP49454 AC002076.2-201ENST00000617362 122 ntBASIC2.15□□□□□ -2.07
CENPFP49454 MIR6132-201ENST00000622083 109 ntBASIC2.15□□□□□ -2.07
CENPFP49454 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CENPFP49454 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CENPFP49454 MIR142-201ENST00000384835 87 ntBASIC2.15□□□□□ -2.07
CENPFP49454 RPL7P37-201ENST00000425095 738 ntBASIC2.15□□□□□ -2.07
CENPFP49454 AL358075.3-201ENST00000426289 226 ntBASIC2.15□□□□□ -2.07
CENPFP49454 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.15□□□□□ -2.07
CENPFP49454 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.15□□□□□ -2.07
CENPFP49454 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.15□□□□□ -2.07
CENPFP49454 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.15□□□□□ -2.07
CENPFP49454 Y_RNA.783-201ENST00000613546 102 ntBASIC2.15□□□□□ -2.07
CENPFP49454 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC2.15□□□□□ -2.07
CENPFP49454 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC2.15□□□□□ -2.07
CENPFP49454 AC233981.2-201ENST00000611524 1614 ntBASIC2.14□□□□□ -2.07
CENPFP49454 AC234781.4-201ENST00000419384 244 ntBASIC2.14□□□□□ -2.07
CENPFP49454 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.14□□□□□ -2.07
CENPFP49454 BX322784.1-201ENST00000455793 1077 ntBASIC2.14□□□□□ -2.07
CENPFP49454 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.14□□□□□ -2.07
CENPFP49454 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms