Protein–RNA interactions for Protein: P30622

CLIP1, CAP-Gly domain-containing linker protein 1, humanhuman

Predictions only

Length 1,438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1P30622 RPL7P54-201ENST00000438336 674 ntBASIC3.17□□□□□ -1.9
CLIP1P30622 HIGD1AP11-201ENST00000438361 280 ntBASIC3.17□□□□□ -1.9
CLIP1P30622 SNORA31.26-201ENST00000517250 137 ntBASIC3.17□□□□□ -1.9
CLIP1P30622 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC3.17□□□□□ -1.9
CLIP1P30622 MIR5089-201ENST00000580047 84 ntBASIC3.17□□□□□ -1.9
CLIP1P30622 AC016542.2-201ENST00000624201 619 ntBASIC3.17□□□□□ -1.9
CLIP1P30622 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CLIP1P30622 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.17□□□□□ -1.9
CLIP1P30622 FAM35CP-201ENST00000554755 2470 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 RNA5SP160-201ENST00000364866 120 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLIP1P30622 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
CLIP1P30622 SNORA80E-201ENST00000384744 137 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 MIR591-201ENST00000385290 95 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 MTND2P16-201ENST00000419987 799 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 ISCA1P6-201ENST00000427740 390 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 AL353093.1-201ENST00000441292 436 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP1P30622 RPS26P21-201ENST00000475397 348 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.16□□□□□ -1.9
CLIP1P30622 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.16□□□□□ -1.9
CLIP1P30622 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.16□□□□□ -1.9
CLIP1P30622 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC3.16□□□□□ -1.9
CLIP1P30622 VIS1.1-201ENST00000610517 203 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CLIP1P30622 AL359893.1-201ENST00000447628 1580 ntBASIC3.16□□□□□ -1.9
CLIP1P30622 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
CLIP1P30622 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.9
CLIP1P30622 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP1P30622 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP1P30622 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP1P30622 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.15□□□□□ -1.91
CLIP1P30622 PTGES3P5-201ENST00000455109 434 ntBASIC3.15□□□□□ -1.91
CLIP1P30622 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.15□□□□□ -1.91
CLIP1P30622 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CLIP1P30622 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP1P30622 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC3.15□□□□□ -1.91
CLIP1P30622 AC005336.3-201ENST00000623833 2679 ntBASIC3.15□□□□□ -1.91
CLIP1P30622 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP1P30622 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.15□□□□□ -1.91
CLIP1P30622 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC3.14□□□□□ -1.91
CLIP1P30622 MIRLET7G-201ENST00000362280 84 ntBASIC3.14□□□□□ -1.91
CLIP1P30622 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CLIP1P30622 RNA5SP338-201ENST00000410495 85 ntBASIC3.14□□□□□ -1.91
CLIP1P30622 AL096701.2-201ENST00000416920 238 ntBASIC3.14□□□□□ -1.91
CLIP1P30622 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.14□□□□□ -1.91
CLIP1P30622 FAM172BP-201ENST00000487497 1089 ntBASIC3.14□□□□□ -1.91
CLIP1P30622 TMEM248P1-201ENST00000510579 951 ntBASIC3.14□□□□□ -1.91
CLIP1P30622 FAM92A1P1-201ENST00000528023 890 ntBASIC3.14□□□□□ -1.91
CLIP1P30622 AC093673.2-201ENST00000609674 331 ntBASIC3.14□□□□□ -1.91
CLIP1P30622 MIR7111-201ENST00000619751 72 ntBASIC3.14□□□□□ -1.91
CLIP1P30622 AC138649.5-201ENST00000637456 137 ntBASIC3.14□□□□□ -1.91
CLIP1P30622 AC010680.1-201ENST00000590024 3590 ntBASIC3.13□□□□□ -1.91
CLIP1P30622 AC027124.2-201ENST00000428249 105 ntBASIC3.13□□□□□ -1.91
CLIP1P30622 AC003989.2-201ENST00000440224 169 ntBASIC3.13□□□□□ -1.91
CLIP1P30622 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.13□□□□□ -1.91
CLIP1P30622 AC017007.3-201ENST00000479865 435 ntBASIC3.13□□□□□ -1.91
CLIP1P30622 AC078918.1-201ENST00000498515 228 ntBASIC3.13□□□□□ -1.91
CLIP1P30622 MTND4LP22-201ENST00000508209 276 ntBASIC3.13□□□□□ -1.91
CLIP1P30622 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.13□□□□□ -1.91
CLIP1P30622 AC244517.12-201ENST00000623581 663 ntBASIC3.13□□□□□ -1.91
CLIP1P30622 AC092184.1-201ENST00000625042 715 ntBASIC3.13□□□□□ -1.91
CLIP1P30622 Y_RNA.4-201ENST00000362333 112 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 CYCSP49-201ENST00000420810 319 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 AC092832.1-201ENST00000422934 400 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.12□□□□□ -1.91
CLIP1P30622 AL157827.1-201ENST00000447622 132 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 AL021397.1-201ENST00000451806 248 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC3.12□□□□□ -1.91
CLIP1P30622 AC092451.1-201ENST00000480211 153 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 MTAPP1-201ENST00000489154 819 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 HMGB3P15-201ENST00000507326 574 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 AC110588.1-201ENST00000559699 137 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 AC009314.1-201ENST00000603871 304 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 AC016727.1-205ENST00000605437 569 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 AC092650.2-201ENST00000619984 902 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.12□□□□□ -1.91
CLIP1P30622 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 AC004943.3-201ENST00000624116 600 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.12□□□□□ -1.91
CLIP1P30622 MTND5P23-201ENST00000430812 1655 ntBASIC3.12□□□□□ -1.91
CLIP1P30622 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.12□□□□□ -1.91
CLIP1P30622 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.11□□□□□ -1.91
CLIP1P30622 AC012321.1-201ENST00000561622 1588 ntBASIC3.11□□□□□ -1.91
CLIP1P30622 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.11□□□□□ -1.91
CLIP1P30622 VTA1P1-201ENST00000414044 866 ntBASIC3.11□□□□□ -1.91
CLIP1P30622 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.11□□□□□ -1.91
CLIP1P30622 AL109741.2-201ENST00000455561 343 ntBASIC3.11□□□□□ -1.91
CLIP1P30622 GTF2IP9-201ENST00000502460 301 ntBASIC3.11□□□□□ -1.91
CLIP1P30622 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.11□□□□□ -1.91
CLIP1P30622 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.11□□□□□ -1.91
CLIP1P30622 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
CLIP1P30622 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CLIP1P30622 RNU1-17P-201ENST00000363022 152 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 RNU6-717P-201ENST00000459076 104 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 AC025033.1-201ENST00000463883 194 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.1□□□□□ -1.91
CLIP1P30622 PRELID2P1-201ENST00000552837 301 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 CKAP2P1-201ENST00000555477 2049 ntBASIC3.1□□□□□ -1.91
CLIP1P30622 API5P2-201ENST00000397055 1498 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms