Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.64□□□□□ -1.83
PDGFRAP16234 snoU13.4-201ENST00000458916 104 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC097493.1-201ENST00000463958 372 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 ST13P14-201ENST00000474095 734 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 RN7SL293P-201ENST00000481765 281 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AP000563.1-201ENST00000490865 758 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.64□□□□□ -1.83
PDGFRAP16234 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.64□□□□□ -1.83
PDGFRAP16234 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC3.64□□□□□ -1.83
PDGFRAP16234 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFRAP16234 SNORA70.19-201ENST00000516717 90 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 OR5AK1P-201ENST00000524837 922 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AP001372.4-201ENST00000524889 472 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFRAP16234 AC024224.1-201ENST00000538284 609 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.64□□□□□ -1.83
PDGFRAP16234 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.64□□□□□ -1.83
PDGFRAP16234 AC080013.3-201ENST00000606839 578 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC069200.1-201ENST00000609511 323 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC097478.2-201ENST00000610572 514 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC019176.2-201ENST00000611579 315 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC013470.4-201ENST00000619978 986 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AL356585.4-201ENST00000623078 1229 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC231657.1-201ENST00000624313 397 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC244258.1-201ENST00000637553 1071 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PDGFRAP16234 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.64□□□□□ -1.83
PDGFRAP16234 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.64□□□□□ -1.83
PDGFRAP16234 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.64□□□□□ -1.83
PDGFRAP16234 MFSD8-233ENST00000641482 4860 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 MTCO1P12-201ENST00000414273 1543 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AF117829.1-206ENST00000621883 3802 ntBASIC3.64□□□□□ -1.83
PDGFRAP16234 AC092326.2-201ENST00000624772 1561 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PDGFRAP16234 AL021368.2-201ENST00000606125 5352 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.63□□□□□ -1.83
PDGFRAP16234 PRO1804-201ENST00000623780 2050 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AP000776.1-201ENST00000530032 1663 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AL645937.1-201ENST00000641739 1652 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PDGFRAP16234 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PDGFRAP16234 ANAPC10P1-201ENST00000395991 556 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 TAF9BP1-201ENST00000396646 746 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 RPL30P2-201ENST00000414021 291 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 TPMTP2-201ENST00000414372 726 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFRAP16234 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFRAP16234 MTCO2P5-201ENST00000422621 426 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AL139421.1-201ENST00000423010 169 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFRAP16234 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFRAP16234 MTCO2P20-201ENST00000437339 673 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 MUPP-201ENST00000438111 566 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFRAP16234 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.63□□□□□ -1.83
PDGFRAP16234 Z82190.1-201ENST00000454534 490 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC025518.1-201ENST00000479856 347 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.63□□□□□ -1.83
PDGFRAP16234 AC021146.8-201ENST00000507455 733 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
PDGFRAP16234 AC026784.1-201ENST00000507986 352 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFRAP16234 DEFB131D-201ENST00000526803 184 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFRAP16234 MTCO2P15-201ENST00000532655 656 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.63□□□□□ -1.83
PDGFRAP16234 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.63□□□□□ -1.83
PDGFRAP16234 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFRAP16234 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.63□□□□□ -1.83
PDGFRAP16234 MIR4474-201ENST00000579189 78 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 SNORD84-203ENST00000584275 78 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC091057.2-201ENST00000602594 792 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC105148.1-201ENST00000604961 409 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AL365503.1-201ENST00000605247 905 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC015967.1-201ENST00000619893 476 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AL360181.4-201ENST00000621752 134 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC004777.1-201ENST00000624317 287 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC006927.4-201ENST00000639187 543 ntBASIC3.63□□□□□ -1.83
PDGFRAP16234 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PDGFRAP16234 OR4G11P-202ENST00000642116 1414 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFRAP16234 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.62□□□□□ -1.83
PDGFRAP16234 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.62□□□□□ -1.83
PDGFRAP16234 AC005539.1-201ENST00000443768 1479 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PDGFRAP16234 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
PDGFRAP16234 RPL23AP57-201ENST00000332361 466 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 SNORA63.1-201ENST00000362493 131 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 RNU6-1074P-201ENST00000383995 104 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 RPL23AP29-201ENST00000397284 453 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
PDGFRAP16234 MIR1284-201ENST00000408337 120 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 RNA5SP129-201ENST00000410276 118 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 BX842559.1-201ENST00000419615 532 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC3.62□□□□□ -1.83
PDGFRAP16234 ATP5JP1-201ENST00000431631 322 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 AL353691.1-201ENST00000451332 387 ntBASIC3.62□□□□□ -1.83
PDGFRAP16234 PRSS3P4-201ENST00000453323 162 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms