Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 AC107021.2-201ENST00000567714 2095 ntBASIC3.36□□□□□ -1.87
CFTRP13569 Y_RNA.355-201ENST00000365462 98 ntBASIC3.35□□□□□ -1.87
CFTRP13569 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC3.35□□□□□ -1.87
CFTRP13569 CBWD4P-201ENST00000445695 655 ntBASIC3.35□□□□□ -1.87
CFTRP13569 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.35□□□□□ -1.87
CFTRP13569 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
CFTRP13569 TPMTP1-201ENST00000592307 737 ntBASIC3.35□□□□□ -1.87
CFTRP13569 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC3.35□□□□□ -1.87
CFTRP13569 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC3.35□□□□□ -1.87
CFTRP13569 AC010678.1-201ENST00000614118 713 ntBASIC3.35□□□□□ -1.87
CFTRP13569 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.35□□□□□ -1.87
CFTRP13569 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.35□□□□□ -1.87
CFTRP13569 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC3.35□□□□□ -1.87
CFTRP13569 AIMP1P1-201ENST00000418670 937 ntBASIC3.35□□□□□ -1.87
CFTRP13569 AC011753.1-201ENST00000451001 220 ntBASIC3.35□□□□□ -1.87
CFTRP13569 LRRC77P-213ENST00000637727 880 ntBASIC3.35□□□□□ -1.87
CFTRP13569 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.34□□□□□ -1.87
CFTRP13569 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CFTRP13569 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.34□□□□□ -1.88
CFTRP13569 SET-203ENST00000372688 801 ntTSL 2 BASIC3.34□□□□□ -1.88
CFTRP13569 RN7SKP123-201ENST00000410732 291 ntBASIC3.34□□□□□ -1.88
CFTRP13569 RNA5SP344-201ENST00000411081 104 ntBASIC3.34□□□□□ -1.88
CFTRP13569 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.34□□□□□ -1.88
CFTRP13569 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.34□□□□□ -1.88
CFTRP13569 RNU6-250P-201ENST00000516958 103 ntBASIC3.34□□□□□ -1.88
CFTRP13569 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC3.34□□□□□ -1.88
CFTRP13569 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.33□□□□□ -1.88
CFTRP13569 Y_RNA.40-201ENST00000362645 93 ntBASIC3.33□□□□□ -1.88
CFTRP13569 AL021407.1-201ENST00000404531 386 ntBASIC3.33□□□□□ -1.88
CFTRP13569 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.33□□□□□ -1.88
CFTRP13569 AC140059.1-201ENST00000489238 361 ntBASIC3.33□□□□□ -1.88
CFTRP13569 AC011352.3-201ENST00000505162 593 ntBASIC3.33□□□□□ -1.88
CFTRP13569 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.33□□□□□ -1.88
CFTRP13569 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.33□□□□□ -1.88
CFTRP13569 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.33□□□□□ -1.88
CFTRP13569 MIR4303-201ENST00000581299 66 ntBASIC3.33□□□□□ -1.88
CFTRP13569 PSMA6P4-201ENST00000603247 718 ntBASIC3.33□□□□□ -1.88
CFTRP13569 AC084768.2-201ENST00000622736 221 ntBASIC3.33□□□□□ -1.88
CFTRP13569 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CFTRP13569 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.33□□□□□ -1.88
CFTRP13569 AL353746.1-201ENST00000566293 6881 ntBASIC3.32□□□□□ -1.88
CFTRP13569 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
CFTRP13569 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.32□□□□□ -1.88
CFTRP13569 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CFTRP13569 RPS15AP12-201ENST00000419498 388 ntBASIC3.32□□□□□ -1.88
CFTRP13569 AL445685.2-201ENST00000422551 342 ntBASIC3.32□□□□□ -1.88
CFTRP13569 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.32□□□□□ -1.88
CFTRP13569 HSPE1P22-201ENST00000456856 327 ntBASIC3.32□□□□□ -1.88
CFTRP13569 MTAPP1-201ENST00000489154 819 ntBASIC3.32□□□□□ -1.88
CFTRP13569 HIGD1AP10-201ENST00000527837 282 ntBASIC3.32□□□□□ -1.88
CFTRP13569 SNRPGP19-201ENST00000603826 189 ntBASIC3.32□□□□□ -1.88
CFTRP13569 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CFTRP13569 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
CFTRP13569 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
CFTRP13569 Y_RNA.269-201ENST00000364685 89 ntBASIC3.31□□□□□ -1.88
CFTRP13569 MIR489-201ENST00000384923 84 ntBASIC3.31□□□□□ -1.88
CFTRP13569 SAR1AP2-201ENST00000392696 594 ntBASIC3.31□□□□□ -1.88
CFTRP13569 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.31□□□□□ -1.88
CFTRP13569 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.31□□□□□ -1.88
CFTRP13569 AC067805.1-201ENST00000559344 470 ntBASIC3.31□□□□□ -1.88
CFTRP13569 MIR4506-201ENST00000584693 77 ntBASIC3.31□□□□□ -1.88
CFTRP13569 NF1P5-201ENST00000588287 448 ntBASIC3.31□□□□□ -1.88
CFTRP13569 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CFTRP13569 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CFTRP13569 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CFTRP13569 RWDD4P2-201ENST00000426392 563 ntBASIC3.3□□□□□ -1.88
CFTRP13569 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.3□□□□□ -1.88
CFTRP13569 RWDD4P1-201ENST00000488019 565 ntBASIC3.3□□□□□ -1.88
CFTRP13569 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.3□□□□□ -1.88
CFTRP13569 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.3□□□□□ -1.88
CFTRP13569 RPS3AP4-201ENST00000555161 764 ntBASIC3.3□□□□□ -1.88
CFTRP13569 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
CFTRP13569 AP000787.2-201ENST00000604432 568 ntBASIC3.3□□□□□ -1.88
CFTRP13569 ZFAT-AS1_2.1-201ENST00000613742 201 ntBASIC3.3□□□□□ -1.88
CFTRP13569 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CFTRP13569 AC005539.1-201ENST00000443768 1479 ntBASIC3.3□□□□□ -1.88
CFTRP13569 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.29□□□□□ -1.88
CFTRP13569 AC011155.1-201ENST00000316512 456 ntBASIC3.29□□□□□ -1.88
CFTRP13569 AL450338.1-201ENST00000407987 512 ntBASIC3.29□□□□□ -1.88
CFTRP13569 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.29□□□□□ -1.88
CFTRP13569 NDUFS5P3-201ENST00000450668 321 ntBASIC3.29□□□□□ -1.88
CFTRP13569 RN7SKP96-201ENST00000516948 297 ntBASIC3.29□□□□□ -1.88
CFTRP13569 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.29□□□□□ -1.88
CFTRP13569 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.29□□□□□ -1.88
CFTRP13569 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.29□□□□□ -1.88
CFTRP13569 DNAJC19P9-201ENST00000555084 351 ntBASIC3.29□□□□□ -1.88
CFTRP13569 AC020895.1-201ENST00000595362 272 ntBASIC3.29□□□□□ -1.88
CFTRP13569 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC3.29□□□□□ -1.88
CFTRP13569 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.29□□□□□ -1.88
CFTRP13569 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3.29□□□□□ -1.88
CFTRP13569 Y_RNA.116-201ENST00000363292 103 ntBASIC3.28□□□□□ -1.88
CFTRP13569 SNORA51.11-201ENST00000384442 131 ntBASIC3.28□□□□□ -1.88
CFTRP13569 RNU6-328P-201ENST00000390887 106 ntBASIC3.28□□□□□ -1.88
CFTRP13569 SNORA67.5-201ENST00000391036 107 ntBASIC3.28□□□□□ -1.88
CFTRP13569 MIR1294-201ENST00000408503 142 ntBASIC3.28□□□□□ -1.88
CFTRP13569 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
CFTRP13569 AP000275.1-201ENST00000411943 390 ntBASIC3.28□□□□□ -1.88
CFTRP13569 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.28□□□□□ -1.88
CFTRP13569 ATP5F1P1-201ENST00000433775 569 ntBASIC3.28□□□□□ -1.88
CFTRP13569 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms