Protein–RNA interactions for Protein: O15457

MSH4, MutS protein homolog 4, humanhuman

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4O15457 AC009039.2-201ENST00000624524 529 ntBASIC3.24□□□□□ -1.89
MSH4O15457 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
MSH4O15457 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.24□□□□□ -1.89
MSH4O15457 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
MSH4O15457 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
MSH4O15457 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AC000367.1-201ENST00000452711 1766 ntBASIC3.23□□□□□ -1.89
MSH4O15457 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.23□□□□□ -1.89
MSH4O15457 SNORA51.2-201ENST00000364595 132 ntBASIC3.23□□□□□ -1.89
MSH4O15457 MTND4LP20-201ENST00000402379 270 ntBASIC3.23□□□□□ -1.89
MSH4O15457 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.23□□□□□ -1.89
MSH4O15457 RPS7P9-201ENST00000414704 586 ntBASIC3.23□□□□□ -1.89
MSH4O15457 RPL21P40-201ENST00000428586 483 ntBASIC3.23□□□□□ -1.89
MSH4O15457 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.23□□□□□ -1.89
MSH4O15457 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.23□□□□□ -1.89
MSH4O15457 AC241584.1-201ENST00000438469 1241 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AC092393.1-201ENST00000439625 742 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AC025750.2-201ENST00000442609 450 ntBASIC3.23□□□□□ -1.89
MSH4O15457 ELOCP13-201ENST00000443934 329 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.23□□□□□ -1.89
MSH4O15457 AL034418.1-201ENST00000448675 860 ntBASIC3.23□□□□□ -1.89
MSH4O15457 NIPA2P5-201ENST00000452282 464 ntBASIC3.23□□□□□ -1.89
MSH4O15457 SNRPGP3-201ENST00000469405 227 ntBASIC3.23□□□□□ -1.89
MSH4O15457 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MSH4O15457 AL049873.1-201ENST00000480540 376 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AC096576.1-201ENST00000489014 359 ntBASIC3.23□□□□□ -1.89
MSH4O15457 C1GALT1P2-201ENST00000510813 1104 ntBASIC3.23□□□□□ -1.89
MSH4O15457 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
MSH4O15457 RNU1-103P-201ENST00000516502 125 ntBASIC3.23□□□□□ -1.89
MSH4O15457 FAM60DP-201ENST00000524174 632 ntBASIC3.23□□□□□ -1.89
MSH4O15457 MTCO3P15-201ENST00000526563 574 ntBASIC3.23□□□□□ -1.89
MSH4O15457 HIGD1AP10-201ENST00000527837 282 ntBASIC3.23□□□□□ -1.89
MSH4O15457 NDUFS5P6-201ENST00000529136 295 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC3.23□□□□□ -1.89
MSH4O15457 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.23□□□□□ -1.89
MSH4O15457 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.23□□□□□ -1.89
MSH4O15457 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.23□□□□□ -1.89
MSH4O15457 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.23□□□□□ -1.89
MSH4O15457 AC024153.1-201ENST00000603103 365 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AL355812.1-201ENST00000603215 216 ntBASIC3.23□□□□□ -1.89
MSH4O15457 RNU6-1192P-201ENST00000612197 107 ntBASIC3.23□□□□□ -1.89
MSH4O15457 RNU6-489P-201ENST00000618289 107 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AC009318.4-201ENST00000620496 486 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.23□□□□□ -1.89
MSH4O15457 AC048347.1-201ENST00000624621 427 ntBASIC3.23□□□□□ -1.89
MSH4O15457 AC087821.2-201ENST00000637086 450 ntBASIC3.23□□□□□ -1.89
MSH4O15457 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.23□□□□□ -1.89
MSH4O15457 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
MSH4O15457 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.22□□□□□ -1.89
MSH4O15457 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
MSH4O15457 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
MSH4O15457 RNU1-35P-201ENST00000362782 153 ntBASIC3.22□□□□□ -1.89
MSH4O15457 RNU6-730P-201ENST00000383954 104 ntBASIC3.22□□□□□ -1.89
MSH4O15457 AC092634.6-201ENST00000418558 192 ntBASIC3.22□□□□□ -1.89
MSH4O15457 MTCO3P1-205ENST00000422088 832 ntBASIC3.22□□□□□ -1.89
MSH4O15457 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.22□□□□□ -1.89
MSH4O15457 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC3.22□□□□□ -1.89
MSH4O15457 PTGES3P1-201ENST00000439531 483 ntBASIC3.22□□□□□ -1.89
MSH4O15457 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.22□□□□□ -1.89
MSH4O15457 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.22□□□□□ -1.89
MSH4O15457 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.22□□□□□ -1.89
MSH4O15457 AL049829.1-201ENST00000465411 156 ntBASIC3.22□□□□□ -1.89
MSH4O15457 AP002884.2-201ENST00000471647 395 ntBASIC3.22□□□□□ -1.89
MSH4O15457 AC069306.1-201ENST00000507006 843 ntBASIC3.22□□□□□ -1.89
MSH4O15457 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.22□□□□□ -1.89
MSH4O15457 AC112206.4-201ENST00000515142 405 ntBASIC3.22□□□□□ -1.89
MSH4O15457 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.22□□□□□ -1.89
MSH4O15457 SNORA48.10-201ENST00000516965 160 ntBASIC3.22□□□□□ -1.89
MSH4O15457 RNU6-1073P-201ENST00000517182 106 ntBASIC3.22□□□□□ -1.89
MSH4O15457 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.22□□□□□ -1.89
MSH4O15457 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC3.22□□□□□ -1.89
MSH4O15457 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.22□□□□□ -1.89
MSH4O15457 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.22□□□□□ -1.89
MSH4O15457 SULT1C2P1-202ENST00000562418 459 ntBASIC3.22□□□□□ -1.89
MSH4O15457 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.22□□□□□ -1.89
MSH4O15457 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.22□□□□□ -1.89
MSH4O15457 AL445435.1-201ENST00000604232 665 ntBASIC3.22□□□□□ -1.89
MSH4O15457 BNIP3P31-201ENST00000604515 566 ntBASIC3.22□□□□□ -1.89
MSH4O15457 AL592148.2-201ENST00000612210 372 ntBASIC3.22□□□□□ -1.89
MSH4O15457 AC109454.4-201ENST00000623411 649 ntBASIC3.22□□□□□ -1.89
MSH4O15457 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC3.22□□□□□ -1.89
MSH4O15457 AC026634.1-201ENST00000634369 198 ntBASIC3.22□□□□□ -1.89
MSH4O15457 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
MSH4O15457 AP001350.1-201ENST00000601906 1524 ntBASIC3.22□□□□□ -1.89
MSH4O15457 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
MSH4O15457 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC3.22□□□□□ -1.89
MSH4O15457 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.21□□□□□ -1.89
MSH4O15457 MYOT-201ENST00000239926 2337 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
MSH4O15457 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
MSH4O15457 GABRG2-229ENST00000641017 3628 ntBASIC3.21□□□□□ -1.9
MSH4O15457 RNA5SP258-201ENST00000362750 119 ntBASIC3.21□□□□□ -1.9
MSH4O15457 RNU6-492P-201ENST00000363035 104 ntBASIC3.21□□□□□ -1.9
MSH4O15457 RNU6-1066P-201ENST00000363573 105 ntBASIC3.21□□□□□ -1.9
MSH4O15457 SNORD82-201ENST00000365530 70 ntBASIC3.21□□□□□ -1.9
MSH4O15457 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MSH4O15457 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
MSH4O15457 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
MSH4O15457 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.21□□□□□ -1.9
MSH4O15457 RN7SKP58-201ENST00000411010 305 ntBASIC3.21□□□□□ -1.9
MSH4O15457 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.21□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms