Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC011037.1-201ENST00000483964 558 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.24□□□□□ -1.73
CUX2O14529 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.24□□□□□ -1.73
CUX2O14529 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.24□□□□□ -1.73
CUX2O14529 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.24□□□□□ -1.73
CUX2O14529 RFPL1S-203ENST00000539579 330 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC4.24□□□□□ -1.73
CUX2O14529 AC011494.1-201ENST00000596454 237 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AC103710.2-201ENST00000609912 942 ntBASIC4.24□□□□□ -1.73
CUX2O14529 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC4.24□□□□□ -1.73
CUX2O14529 AC090617.9-201ENST00000623751 147 ntBASIC4.24□□□□□ -1.73
CUX2O14529 MTND4P31-201ENST00000425607 1343 ntBASIC4.23□□□□□ -1.73
CUX2O14529 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC4.23□□□□□ -1.73
CUX2O14529 RNF6P1-201ENST00000444889 1784 ntBASIC4.23□□□□□ -1.73
CUX2O14529 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
CUX2O14529 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CUX2O14529 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.23□□□□□ -1.73
CUX2O14529 RPL7P54-201ENST00000438336 674 ntBASIC4.23□□□□□ -1.73
CUX2O14529 MTCO3P43-201ENST00000440974 771 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL353093.1-201ENST00000441292 436 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AC092685.1-201ENST00000447960 1243 ntBASIC4.23□□□□□ -1.73
CUX2O14529 RPL21P18-201ENST00000469899 480 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AC104090.1-201ENST00000506341 1171 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.23□□□□□ -1.73
CUX2O14529 AC068446.3-201ENST00000555285 382 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.6-201ENST00000603753 252 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.11-201ENST00000604059 253 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.10-201ENST00000604330 253 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AC008162.1-201ENST00000604718 254 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.1-201ENST00000604752 252 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.2-201ENST00000604983 252 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.5-201ENST00000605253 252 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.4-201ENST00000605279 254 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.12-201ENST00000605291 253 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.8-201ENST00000605353 252 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.9-201ENST00000605428 253 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL670379.7-201ENST00000605823 252 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AL450270.1-201ENST00000606160 391 ntBASIC4.23□□□□□ -1.73
CUX2O14529 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.23□□□□□ -1.73
CUX2O14529 Z99129.2-201ENST00000619967 314 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AC091046.2-201ENST00000620775 665 ntBASIC4.23□□□□□ -1.73
CUX2O14529 YWHAEP7-203ENST00000622054 312 ntBASIC4.23□□□□□ -1.73
CUX2O14529 MIR6873-201ENST00000622788 63 ntBASIC4.23□□□□□ -1.73
CUX2O14529 HPVC1-201ENST00000629899 1198 ntBASIC4.23□□□□□ -1.73
CUX2O14529 AC090229.1-201ENST00000590983 1609 ntBASIC4.23□□□□□ -1.73
CUX2O14529 GABPAP-201ENST00000419271 1356 ntBASIC4.22□□□□□ -1.73
CUX2O14529 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC4.22□□□□□ -1.73
CUX2O14529 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
CUX2O14529 XKRYP4-201ENST00000414395 483 ntBASIC4.22□□□□□ -1.73
CUX2O14529 CR769767.1-201ENST00000436337 346 ntBASIC4.22□□□□□ -1.73
CUX2O14529 AC007000.2-201ENST00000442564 487 ntBASIC4.22□□□□□ -1.73
CUX2O14529 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC4.22□□□□□ -1.73
CUX2O14529 XKRYP5-201ENST00000449659 483 ntBASIC4.22□□□□□ -1.73
CUX2O14529 MTND2P8-201ENST00000450555 1025 ntBASIC4.22□□□□□ -1.73
CUX2O14529 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC4.22□□□□□ -1.73
CUX2O14529 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC4.22□□□□□ -1.73
CUX2O14529 AC018618.2-201ENST00000604770 446 ntBASIC4.22□□□□□ -1.73
CUX2O14529 AL118496.1-201ENST00000440201 1812 ntBASIC4.22□□□□□ -1.73
CUX2O14529 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.21□□□□□ -1.73
CUX2O14529 RNU2-17P-201ENST00000410290 190 ntBASIC4.21□□□□□ -1.74
CUX2O14529 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.21□□□□□ -1.74
CUX2O14529 AC010881.1-201ENST00000433830 235 ntBASIC4.21□□□□□ -1.74
CUX2O14529 NDUFB4P6-201ENST00000436819 366 ntBASIC4.21□□□□□ -1.74
CUX2O14529 MOB1AP2-201ENST00000446060 614 ntBASIC4.21□□□□□ -1.74
CUX2O14529 AC087385.1-201ENST00000475062 312 ntBASIC4.21□□□□□ -1.74
CUX2O14529 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC4.21□□□□□ -1.74
CUX2O14529 AC005840.1-201ENST00000498412 377 ntBASIC4.21□□□□□ -1.74
CUX2O14529 AC103833.1-201ENST00000517442 172 ntBASIC4.21□□□□□ -1.74
CUX2O14529 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.21□□□□□ -1.74
CUX2O14529 OR8L1P-201ENST00000534005 955 ntBASIC4.21□□□□□ -1.74
CUX2O14529 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.21□□□□□ -1.74
CUX2O14529 SNRPGP18-201ENST00000553000 214 ntBASIC4.21□□□□□ -1.74
CUX2O14529 CR381653.2-201ENST00000624041 768 ntBASIC4.21□□□□□ -1.74
CUX2O14529 MINDY3-202ENST00000378036 2452 ntTSL 2 BASIC4.21□□□□□ -1.74
CUX2O14529 AC025125.1-201ENST00000624743 1922 ntBASIC4.21□□□□□ -1.74
CUX2O14529 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
CUX2O14529 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
CUX2O14529 ANKRD18EP-201ENST00000405487 2632 ntBASIC4.21□□□□□ -1.74
CUX2O14529 AC027514.1-201ENST00000588561 1603 ntBASIC4.21□□□□□ -1.74
CUX2O14529 MIR378A-201ENST00000362177 66 ntBASIC4.2□□□□□ -1.74
CUX2O14529 AL355379.1-201ENST00000405542 640 ntBASIC4.2□□□□□ -1.74
CUX2O14529 RNU4-74P-201ENST00000411280 161 ntBASIC4.2□□□□□ -1.74
CUX2O14529 TATDN1P1-201ENST00000414123 891 ntBASIC4.2□□□□□ -1.74
CUX2O14529 SPA17P1-201ENST00000416656 452 ntBASIC4.2□□□□□ -1.74
CUX2O14529 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC4.2□□□□□ -1.74
CUX2O14529 CYCSP49-201ENST00000420810 319 ntBASIC4.2□□□□□ -1.74
CUX2O14529 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.2□□□□□ -1.74
CUX2O14529 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.2□□□□□ -1.74
CUX2O14529 AC004866.2-201ENST00000438285 481 ntBASIC4.2□□□□□ -1.74
CUX2O14529 IFNWP4-201ENST00000453148 294 ntBASIC4.2□□□□□ -1.74
CUX2O14529 RPL23AP44-201ENST00000482216 473 ntBASIC4.2□□□□□ -1.74
CUX2O14529 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.2□□□□□ -1.74
CUX2O14529 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.2□□□□□ -1.74
CUX2O14529 CIR1P1-201ENST00000524055 1133 ntBASIC4.2□□□□□ -1.74
CUX2O14529 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC4.2□□□□□ -1.74
CUX2O14529 AC025260.1-201ENST00000548858 430 ntBASIC4.2□□□□□ -1.74
CUX2O14529 LINC00557-201ENST00000563184 1279 ntBASIC4.2□□□□□ -1.74
CUX2O14529 AC135178.6-201ENST00000605314 398 ntBASIC4.2□□□□□ -1.74
CUX2O14529 AC017076.1-201ENST00000607613 578 ntBASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms