Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 U3.11-201ENST00000364476 212 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 SNORA62-201ENST00000365493 153 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 Y_RNA.408-201ENST00000383987 102 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 SNORA40.2-201ENST00000390847 128 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC025750.1-201ENST00000399891 379 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC068533.2-201ENST00000411872 306 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 RPL32P35-201ENST00000415214 394 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AL356320.2-201ENST00000417263 507 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 NDUFB4P7-201ENST00000423198 363 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AL356867.1-201ENST00000429623 299 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC009237.8-201ENST00000445492 379 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 ARPC3P5-201ENST00000448802 534 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 RPL18AP17-201ENST00000455326 198 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 RN7SL610P-201ENST00000463845 291 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC092185.1-201ENST00000491371 97 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC093677.1-201ENST00000514414 678 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 SNORA31.22-201ENST00000517204 135 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 MAL2-206ENST00000522187 547 ntTSL 4 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 NBEAP1-201ENST00000554452 979 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC090695.1-201ENST00000561269 1222 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC034268.2-201ENST00000571784 482 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 ANKRD36BP2-206ENST00000575193 1245 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 MIR5187-201ENST00000583479 76 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AP001429.1-201ENST00000602568 530 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AL606834.3-201ENST00000602615 496 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 U73023.1-201ENST00000603134 700 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC011451.2-201ENST00000604303 598 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AL133507.1-201ENST00000605269 557 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 AC090132.2-201ENST00000615881 347 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 TECRL-202ENST00000507440 2876 ntTSL 5 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 FAM35BP-202ENST00000497389 3337 ntBASIC2.44□□□□□ -2.02
SMKR1H3BMG3 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.44□□□□□ -2.02
SMKR1H3BMG3 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 RPL23AP57-201ENST00000332361 466 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 MIR372-201ENST00000362225 67 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 U3.6-201ENST00000363622 211 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 RPL21P3-201ENST00000395517 478 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 TPMTP2-201ENST00000414372 726 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AL139421.1-201ENST00000423010 169 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 GAS5-208ENST00000425771 242 ntTSL 3 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 NIPA2P1-201ENST00000426223 976 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 TAAR7P-201ENST00000436141 242 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 CST9LP2-201ENST00000437612 320 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC092798.1-201ENST00000458542 409 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 RNU6-420P-201ENST00000458780 107 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC146507.2-201ENST00000460608 476 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 RN7SL75P-201ENST00000461926 281 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AL133162.1-201ENST00000463228 453 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC091564.1-201ENST00000464563 479 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 RPL7P19-201ENST00000469948 618 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 RN7SL283P-201ENST00000489055 303 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 CEACAMP10-202ENST00000495431 496 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC147055.4-201ENST00000504399 745 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 XKRY-201ENST00000510392 1100 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 RAC1P5-201ENST00000512182 576 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC006499.2-201ENST00000513470 337 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 RNU6-528P-201ENST00000516926 100 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 RNU6-56P-201ENST00000516986 93 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 SNORA31.26-201ENST00000517250 137 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC007991.1-201ENST00000522680 631 ntBASIC2.43□□□□□ -2.02
SMKR1H3BMG3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.43□□□□□ -2.02
SMKR1H3BMG3 AC005832.3-201ENST00000537929 631 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms