Protein–RNA interactions for Protein: A8TX70

COL6A5, Collagen alpha-5(VI) chain, humanhuman

Predictions only

Length 2,615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5A8TX70 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A5A8TX70 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A5A8TX70 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A5A8TX70 RNA5SP210-201ENST00000391034 120 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 CASP3-203ENST00000393588 677 ntTSL 4 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 AC240504.1-201ENST00000395709 845 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 AL583834.1-201ENST00000406943 343 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 GTF2IP23-201ENST00000423746 351 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 RNA5SP200-201ENST00000516360 103 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 MTCYBP20-201ENST00000524239 1129 ntBASIC1.68□□□□□ -2.14
COL6A5A8TX70 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC1.68□□□□□ -2.14
COL6A5A8TX70 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC1.68□□□□□ -2.14
COL6A5A8TX70 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
COL6A5A8TX70 AC016717.2-201ENST00000609089 5141 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC1.67□□□□□ -2.14
COL6A5A8TX70 SNORA25.6-201ENST00000364121 118 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 RNU1-57P-201ENST00000384491 166 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.67□□□□□ -2.14
COL6A5A8TX70 SDCBPP3-201ENST00000419629 891 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC1.67□□□□□ -2.14
COL6A5A8TX70 RPS6P12-201ENST00000432491 726 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 HMGB1P12-201ENST00000438594 598 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 AL118520.1-201ENST00000450770 291 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC1.67□□□□□ -2.14
COL6A5A8TX70 OR4A45P-201ENST00000529954 901 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC1.67□□□□□ -2.14
COL6A5A8TX70 AC093775.1-201ENST00000624154 1868 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL6A5A8TX70 Y_RNA.390-201ENST00000383932 102 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 AC233279.1-201ENST00000455300 423 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC1.67□□□□□ -2.14
COL6A5A8TX70 SCARNA16.3-201ENST00000516595 184 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 MTCYBP19-201ENST00000517463 1124 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC1.67□□□□□ -2.14
COL6A5A8TX70 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.67□□□□□ -2.14
COL6A5A8TX70 VN1R79P-201ENST00000593540 513 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 AL365503.1-201ENST00000605247 905 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 AC091834.1-201ENST00000614543 472 ntBASIC1.67□□□□□ -2.14
COL6A5A8TX70 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.67□□□□□ -2.14
COL6A5A8TX70 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.67□□□□□ -2.14
COL6A5A8TX70 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC090229.1-201ENST00000590983 1609 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 Y_RNA.327-201ENST00000365201 102 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 VN1R108P-201ENST00000431580 830 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 MRPL50P4-201ENST00000446432 475 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 FABP5P13-201ENST00000452144 328 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC147055.1-201ENST00000509261 750 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 RNA5SP182-201ENST00000516064 82 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 OR4R2P-201ENST00000530815 597 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL6A5A8TX70 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
COL6A5A8TX70 AL034379.1-201ENST00000423216 253 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 RPL23AP63-201ENST00000498752 471 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC011352.3-201ENST00000505162 593 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC091515.1-201ENST00000548110 679 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 AL450489.1-201ENST00000612071 468 ntBASIC1.66□□□□□ -2.14
COL6A5A8TX70 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC1.66□□□□□ -2.14
COL6A5A8TX70 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
COL6A5A8TX70 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
COL6A5A8TX70 TAB2-201ENST00000367456 4553 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
COL6A5A8TX70 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
COL6A5A8TX70 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
COL6A5A8TX70 RNA5SP190-201ENST00000365222 118 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC1.65□□□□□ -2.15
COL6A5A8TX70 AC015971.1-202ENST00000439077 514 ntTSL 3 BASIC1.65□□□□□ -2.15
COL6A5A8TX70 AC003989.2-201ENST00000440224 169 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 RNU1-123P-201ENST00000458950 160 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 RPL21P71-201ENST00000465598 459 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 AC021382.1-201ENST00000483523 359 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 ARL4AP2-201ENST00000507378 601 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 AC096772.1-201ENST00000609146 564 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 AL359198.2-201ENST00000611836 194 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 AF127577.6-201ENST00000623352 2191 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC1.65□□□□□ -2.15
COL6A5A8TX70 ZNF542P-204ENST00000482727 1305 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC1.65□□□□□ -2.15
COL6A5A8TX70 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
COL6A5A8TX70 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
COL6A5A8TX70 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC1.65□□□□□ -2.15
COL6A5A8TX70 AC011037.1-201ENST00000483964 558 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC1.65□□□□□ -2.15
COL6A5A8TX70 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC1.65□□□□□ -2.15
COL6A5A8TX70 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC1.65□□□□□ -2.15
COL6A5A8TX70 AP001005.3-201ENST00000622049 129 ntBASIC1.65□□□□□ -2.15
COL6A5A8TX70 SLC25A46-204ENST00000504098 2345 ntTSL 5 BASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 120.4 ms