Protein–RNA interactions for Protein: Q9Y261

FOXA2, Hepatocyte nuclear factor 3-beta, humanhuman

Predicted RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2Q9Y261 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AL117339.2-201ENST00000430475 180 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 UBE2V1P13-201ENST00000436983 439 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 TXNP1-201ENST00000441872 371 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 MTND1P9-201ENST00000453775 944 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC104308.1-201ENST00000454621 333 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AL359385.1-201ENST00000456509 365 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 RPL21P11-201ENST00000461458 483 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC104685.1-201ENST00000502445 371 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC034159.1-201ENST00000513885 583 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 RN7SKP209-201ENST00000516888 304 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 SUMO2P20-201ENST00000520803 283 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC023050.2-201ENST00000544968 387 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AL031281.1-201ENST00000604049 488 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 TUSC7.1-201ENST00000610969 165 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AL161637.1-201ENST00000622380 412 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC091905.1-201ENST00000624400 311 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC010733.2-201ENST00000589496 5702 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AC087359.1-201ENST00000508335 1740 ntBASIC3.13□□□□□ -1.91
FOXA2Q9Y261 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
FOXA2Q9Y261 AP000526.1-201ENST00000603308 1388 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC011460.1-201ENST00000636268 1834 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 RNU6-114P-201ENST00000384704 105 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 MIR199A2-201ENST00000385289 110 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 RPL7L1P10-201ENST00000427790 463 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 MTND1P32-201ENST00000433043 938 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 OR4C10P-201ENST00000434991 931 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 NDUFB4P6-201ENST00000436819 366 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 Z80107.1-201ENST00000436830 412 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 Z73417.1-201ENST00000447373 778 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AL590664.1-201ENST00000448065 339 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 RPL36AP33-201ENST00000450395 310 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 NANOGP10-201ENST00000453325 895 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 HSPE1P6-201ENST00000479457 291 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC002456.2-201ENST00000509356 380 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 MTND5P4-201ENST00000514978 288 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 UBTFL10-201ENST00000528532 562 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 PDCL2P2-201ENST00000533651 189 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 YPEL5P3-201ENST00000547227 352 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC008056.1-201ENST00000553322 394 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC120057.2-201ENST00000571520 271 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC141257.3-201ENST00000572906 215 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 MIR5047-201ENST00000579212 100 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AC106791.2-201ENST00000604680 391 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 AL592436.1-201ENST00000605135 558 ntBASIC3.12□□□□□ -1.91
FOXA2Q9Y261 BRDTP1-201ENST00000605735 677 ntBASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms