Protein–RNA interactions for Protein: Q9P2H5

USP35, Ubiquitin carboxyl-terminal hydrolase 35, humanhuman

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP35Q9P2H5 USP8P1-201ENST00000494673 3183 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP35Q9P2H5 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
USP35Q9P2H5 AC009902.3-201ENST00000606235 2172 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 SNORA51.2-201ENST00000364595 132 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 RNU4-91P-201ENST00000364778 135 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 MIR483-201ENST00000385070 76 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
USP35Q9P2H5 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 AC091390.3-201ENST00000426478 338 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 HLA-N-201ENST00000437516 135 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 EPS15P1-201ENST00000448836 336 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 AC010285.1-201ENST00000470580 392 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 ACTR3P3-201ENST00000480448 893 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 RPS26P15-201ENST00000488067 348 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 MAL2-203ENST00000534619 578 ntTSL 4 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 CCNG2P1-201ENST00000549521 1000 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 AC120057.2-201ENST00000571520 271 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 AC034268.2-201ENST00000571784 482 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 TPMTP1-201ENST00000592307 737 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 SRGNP1-201ENST00000603392 451 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 AC009090.3-201ENST00000616553 565 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 AL353748.2-201ENST00000622148 471 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC5.68□□□□□ -1.5
USP35Q9P2H5 AL513185.3-201ENST00000433335 1300 ntBASIC5.68□□□□□ -1.5
USP35Q9P2H5 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
USP35Q9P2H5 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 AP002001.2-201ENST00000529025 1469 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 RNA5SP502-201ENST00000362694 119 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 SNORA9-201ENST00000384215 133 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 AL359704.1-201ENST00000411586 781 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC068533.1-201ENST00000418542 415 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 UBTFL3-201ENST00000418934 1024 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 SEPT2P1-201ENST00000419651 180 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 CYCSP46-201ENST00000423569 204 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 BX119904.4-201ENST00000424402 301 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC010655.1-201ENST00000449336 292 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC098824.1-201ENST00000453565 980 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 AP000797.1-201ENST00000478870 387 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 AL592156.1-201ENST00000508758 304 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 RNU6-1003P-201ENST00000517099 105 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 NBR2-204ENST00000587322 63 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC007179.3-201ENST00000604976 235 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC080013.6-201ENST00000606185 215 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 SNORA51-201ENST00000606420 132 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 AC073114.1-201ENST00000612027 490 ntBASIC5.67□□□□□ -1.5
USP35Q9P2H5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
USP35Q9P2H5 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC5.67□□□□□ -1.5
USP35Q9P2H5 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP35Q9P2H5 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 FRG1BP-201ENST00000278882 761 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP35Q9P2H5 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP35Q9P2H5 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
USP35Q9P2H5 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 GDI2P2-201ENST00000445131 608 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 SNRPGP5-201ENST00000456003 220 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 SNRPFP4-201ENST00000456366 242 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 AC096751.1-202ENST00000502691 1067 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 AC025881.1-201ENST00000518851 512 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP35Q9P2H5 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 AL160290.3-201ENST00000604869 165 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 AC093783.1-201ENST00000612976 329 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 AC015967.1-201ENST00000619893 476 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 AC103858.2-201ENST00000621471 543 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 AL357559.1-201ENST00000622228 274 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 AC011460.1-201ENST00000636268 1834 ntBASIC5.66□□□□□ -1.5
USP35Q9P2H5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC5.66□□□□□ -1.5
USP35Q9P2H5 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
USP35Q9P2H5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
USP35Q9P2H5 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
USP35Q9P2H5 RNU5F-7P-201ENST00000363696 115 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms