Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 CCDC58P3-201ENST00000590792 430 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 U7.8-201ENST00000619968 63 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AC002550.2-201ENST00000621246 394 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AC022336.2-201ENST00000568966 2538 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AC058791.1-201ENST00000608412 3198 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AC007066.1-201ENST00000392902 381 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 EI24P2-201ENST00000397776 1076 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 DHFRP6-201ENST00000401776 268 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AL136310.1-201ENST00000404926 654 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 SNRPEP7-201ENST00000438350 220 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AC026403.1-201ENST00000518938 295 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 NAT2-202ENST00000520116 716 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 MIR3908-201ENST00000579798 126 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AC027309.3-201ENST00000623419 351 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 AC012442.3-202ENST00000636742 206 ntBASIC4.75□□□□□ -1.65
CHMP4AQ9BY43 OR5BR1P-201ENST00000524992 1330 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 ZNF285B-201ENST00000561698 1767 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AL359837.1-201ENST00000381357 287 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 SNORA5A-201ENST00000384111 134 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 TAF9BP1-201ENST00000396646 746 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 RPS3AP24-201ENST00000407896 734 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 RNA5SP80-201ENST00000410475 111 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 RHEBP3-201ENST00000411920 351 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 THAP5P1-201ENST00000439089 262 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 PDSS1P2-201ENST00000449397 678 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 SUN3-208ENST00000453192 801 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 MTCO3P20-201ENST00000454926 688 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 TRBV12-2-201ENST00000489763 344 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 PCBP2P3-201ENST00000509726 843 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 RNA5SP216-201ENST00000516111 123 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 RNU6-528P-201ENST00000516926 100 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 OR5G4P-201ENST00000525251 760 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AL353997.4-201ENST00000586196 166 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AC069209.1-201ENST00000619282 651 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 MIR6075-201ENST00000620782 95 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 AL732618.1-201ENST00000623251 301 ntBASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC4.74□□□□□ -1.65
CHMP4AQ9BY43 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC099654.7-201ENST00000635788 2127 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC007496.3-201ENST00000624987 3443 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 RNU5A-1-201ENST00000362698 116 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 Y_RNA.311-201ENST00000365068 96 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 RNU6-76P-201ENST00000384060 104 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AL449283.1-202ENST00000418249 604 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 NDUFB4P7-201ENST00000423198 363 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AC091862.1-201ENST00000438016 1100 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 VN1R34P-201ENST00000447387 883 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 AL031313.1-201ENST00000448435 256 ntBASIC4.73□□□□□ -1.65
CHMP4AQ9BY43 USP9YP10-201ENST00000454868 628 ntBASIC4.73□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms