Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX3Q99909 DNAJC19P1-201ENST00000455312 319 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 BX322784.1-201ENST00000455793 1077 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 VN1R105P-201ENST00000486595 910 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX3Q99909 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC3.25□□□□□ -1.89
SSX3Q99909 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.25□□□□□ -1.89
SSX3Q99909 SNORD59.2-201ENST00000516873 68 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
SSX3Q99909 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX3Q99909 AC091516.1-201ENST00000549191 703 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX3Q99909 DUXAP1-201ENST00000556632 463 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX3Q99909 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX3Q99909 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.25□□□□□ -1.89
SSX3Q99909 BBIP1P1-201ENST00000602999 279 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AL133393.1-201ENST00000603277 287 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AL031176.1-201ENST00000604554 466 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AL109618.2-201ENST00000605527 211 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AL390208.1-201ENST00000605885 644 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.25□□□□□ -1.89
SSX3Q99909 AC009570.1-201ENST00000609599 745 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 TUSC7.1-201ENST00000610969 165 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AC011330.2-201ENST00000621680 635 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AL161637.1-201ENST00000622380 412 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AL773545.4-201ENST00000637262 310 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 AL513478.4-201ENST00000641636 310 ntBASIC3.25□□□□□ -1.89
SSX3Q99909 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSX3Q99909 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSX3Q99909 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSX3Q99909 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX3Q99909 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.24□□□□□ -1.89
SSX3Q99909 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSX3Q99909 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
SSX3Q99909 RNU6-952P-201ENST00000391164 108 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSX3Q99909 AL356131.1-201ENST00000405826 414 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC3.24□□□□□ -1.89
SSX3Q99909 TRIAP1P1-201ENST00000427062 225 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX3Q99909 RPL21P40-201ENST00000428586 483 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 ZYG11AP1-201ENST00000430329 837 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 MTCYBP45-201ENST00000435243 565 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AC122718.1-201ENST00000439448 744 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 RPS29P7-201ENST00000439662 171 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX3Q99909 OR6K5P-201ENST00000447050 945 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 USP9YP10-201ENST00000454868 628 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 ANKRD26P4-201ENST00000455755 950 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX3Q99909 MEMO1P3-201ENST00000459811 302 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 FAM133DP-201ENST00000464802 691 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AC092185.1-201ENST00000491371 97 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX3Q99909 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.24□□□□□ -1.89
SSX3Q99909 NPM1P41-201ENST00000512920 831 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.24□□□□□ -1.89
SSX3Q99909 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSX3Q99909 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 CR383656.7-201ENST00000548164 174 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.24□□□□□ -1.89
SSX3Q99909 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.24□□□□□ -1.89
SSX3Q99909 AC090615.1-201ENST00000577519 154 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX3Q99909 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.24□□□□□ -1.89
SSX3Q99909 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSX3Q99909 AC022022.2-201ENST00000602989 360 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AC114878.2-201ENST00000604863 1251 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AC112220.3-201ENST00000605502 502 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AC012443.1-201ENST00000605605 231 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 RMST_8.1-201ENST00000610287 165 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 AL357080.1-201ENST00000617394 239 ntBASIC3.24□□□□□ -1.89
SSX3Q99909 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.24□□□□□ -1.89
SSX3Q99909 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSX3Q99909 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SSX3Q99909 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.24□□□□□ -1.89
SSX3Q99909 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
SSX3Q99909 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSX3Q99909 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSX3Q99909 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
SSX3Q99909 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSX3Q99909 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.23□□□□□ -1.89
SSX3Q99909 SNORA4.1-201ENST00000364263 144 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSX3Q99909 AL136372.1-201ENST00000403060 228 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 FAT1P1-201ENST00000406588 507 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 MIR1251-201ENST00000408552 70 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.23□□□□□ -1.89
SSX3Q99909 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 127.3 ms