Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 SNORD56.2-201ENST00000363242 71 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 RNY3P3-201ENST00000363816 102 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 RNA5SP28-201ENST00000363841 119 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 RNU6-1322P-201ENST00000364309 107 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 MIR134-201ENST00000385258 73 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 RNA5SP332-201ENST00000391063 115 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 SNRPEP10-201ENST00000420249 274 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC099336.2-201ENST00000422457 254 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 RWDD4P2-201ENST00000426392 563 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 GTF2IP20-201ENST00000431663 360 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 RPL7P54-201ENST00000438336 674 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC092013.1-201ENST00000438795 332 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AL049734.2-201ENST00000441066 616 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 CALM1P1-201ENST00000442082 433 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 GEMIN8P3-201ENST00000445417 720 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 RPL23AP43-201ENST00000446445 471 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 OR1H1P-201ENST00000448731 937 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC099560.2-201ENST00000457554 255 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC104057.1-201ENST00000515547 497 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC107934.1-201ENST00000522215 217 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC124068.1-201ENST00000563131 678 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AL138976.2-201ENST00000563989 694 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC099489.2-201ENST00000574976 260 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 MIR3160-1-201ENST00000577972 85 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 MIR4429-201ENST00000580105 73 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 MIR4737-201ENST00000583979 81 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC123786.2-201ENST00000603459 275 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AL138721.1-201ENST00000616756 179 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AC034229.5-201ENST00000624258 185 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 RPS4XP5-202ENST00000449995 1334 ntBASIC5.16□□□□□ -1.58
CHAMP1Q96JM3 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.15□□□□□ -1.58
CHAMP1Q96JM3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CHAMP1Q96JM3 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.15□□□□□ -1.58
CHAMP1Q96JM3 AC092125.1-201ENST00000562568 1995 ntBASIC5.15□□□□□ -1.58
CHAMP1Q96JM3 ZFRP1-201ENST00000457579 2970 ntBASIC5.15□□□□□ -1.58
CHAMP1Q96JM3 FRG1BP-201ENST00000278882 761 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 RNA5SP22-201ENST00000365393 109 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 FGFR1OP2P1-201ENST00000395943 500 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AL583835.1-201ENST00000399570 407 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 MRPL42P2-201ENST00000403169 426 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 RNU2-21P-201ENST00000410368 188 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 RN7SKP100-201ENST00000411258 284 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 NUP35P2-201ENST00000416748 943 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC073136.2-201ENST00000417282 849 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AL592293.2-201ENST00000422292 996 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC019097.1-201ENST00000424783 735 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AL035410.1-201ENST00000427409 427 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AL136380.1-201ENST00000447970 162 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 RAD23BP3-201ENST00000454157 1152 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 RPL12P20-201ENST00000475538 479 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC012158.1-204ENST00000483430 465 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 TXNP6-201ENST00000510190 310 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 MIR4504-201ENST00000577413 92 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 RMST_3.1-201ENST00000611651 109 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 SMCR2_2.1-201ENST00000619783 161 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC007546.2-201ENST00000623996 360 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 MAPK10-304ENST00000641341 3984 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC097714.1-201ENST00000511272 1647 ntBASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
CHAMP1Q96JM3 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 LINC00622-201ENST00000562811 1570 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AL161781.1-201ENST00000354277 403 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 RNU6-451P-201ENST00000362921 107 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 Y_RNA.535-201ENST00000384612 99 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 AC068050.1-201ENST00000394891 380 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 VDAC1P9-201ENST00000412766 841 ntBASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CHAMP1Q96JM3 MAP1LC3BP1-201ENST00000417653 379 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms