Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 RNU6-413P-201ENST00000384115 107 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 RNU6-1197P-201ENST00000391183 107 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 RPS3AP24-201ENST00000407896 734 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 RNU6ATAC-201ENST00000408749 126 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 TEX41-203ENST00000420472 765 ntTSL 3 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 AC122718.1-201ENST00000439448 744 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 RPL26P6-201ENST00000440913 438 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
VMP1Q96GC9 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 RPS17P13-201ENST00000448974 407 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 FAM133DP-201ENST00000464802 691 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 ACTG1P13-201ENST00000486987 1043 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 RPL7P38-201ENST00000488396 739 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 AC109464.2-201ENST00000510242 943 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 AC006499.2-201ENST00000513470 337 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 MIR5186-201ENST00000577504 120 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 AC011451.2-201ENST00000604303 598 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 AL158050.2-201ENST00000605336 568 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 AL450472.3-201ENST00000615578 367 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 AL357080.1-201ENST00000617394 239 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VMP1Q96GC9 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
VMP1Q96GC9 AC090772.4-201ENST00000623599 362 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 AC099654.8-201ENST00000637757 681 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 API5P2-201ENST00000397055 1498 ntBASIC3.58□□□□□ -1.84
VMP1Q96GC9 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.58□□□□□ -1.84
VMP1Q96GC9 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VMP1Q96GC9 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
VMP1Q96GC9 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VMP1Q96GC9 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 MIR134-201ENST00000385258 73 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 RNA5SP252-201ENST00000391131 119 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 SOD2P1-201ENST00000396543 562 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC007389.2-201ENST00000434630 306 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC007327.1-201ENST00000447461 264 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 RNU7-136P-201ENST00000458819 69 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC010468.1-201ENST00000461022 817 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC097493.1-201ENST00000463958 372 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC084357.1-201ENST00000473404 255 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 MTCO1P9-201ENST00000505577 1534 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC006445.2-201ENST00000510061 472 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC093677.1-201ENST00000514414 678 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 RN7SKP282-201ENST00000516824 299 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 RNU6-352P-201ENST00000516908 107 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC087499.8-201ENST00000578406 226 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC006130.2-201ENST00000586202 326 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC069431.2-201ENST00000604149 1099 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC069209.1-201ENST00000619282 651 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AL161637.1-201ENST00000622380 412 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC027309.3-201ENST00000623419 351 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC091905.1-201ENST00000624400 311 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 AC233263.6-201ENST00000631132 1963 ntBASIC3.57□□□□□ -1.84
VMP1Q96GC9 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
VMP1Q96GC9 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AL390862.1-201ENST00000635467 1469 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC005832.2-201ENST00000538921 1430 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 OR5BR1P-201ENST00000524992 1330 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
VMP1Q96GC9 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 CFHR3-203ENST00000391985 1043 ntTSL 2 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 RPL31P12-201ENST00000422587 358 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC092573.2-201ENST00000434546 243 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 Z74696.2-201ENST00000436514 498 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC010655.1-201ENST00000449336 292 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 snoU13.8-201ENST00000458890 104 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC034236.1-201ENST00000469891 373 ntBASIC3.56□□□□□ -1.84
VMP1Q96GC9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.56□□□□□ -1.84
VMP1Q96GC9 RNY4P37-201ENST00000516225 96 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms