Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 RPS29P31-201ENST00000446147 164 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC002381.1-201ENST00000447049 280 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 PAXBP1P1-201ENST00000449315 447 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 USP9YP10-201ENST00000454868 628 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC092798.1-201ENST00000458542 409 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC104472.2-201ENST00000469035 601 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 RNA5SP216-201ENST00000516111 123 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 RNU6-714P-201ENST00000516963 103 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 RN7SKP60-201ENST00000516985 239 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 HMGN1P28-201ENST00000521340 364 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC008489.1-201ENST00000524271 483 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 OR7E13P-201ENST00000526052 910 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTP4A1Q93096 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC006960.3-201ENST00000561845 705 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 MIR4697-201ENST00000582977 78 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC091057.3-201ENST00000602684 733 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AL133393.1-201ENST00000603277 287 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AL606490.9-201ENST00000603331 271 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 SNORA62.6-201ENST00000606322 83 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC107075.1-201ENST00000613695 314 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AL450472.3-201ENST00000615578 367 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 AC006213.4-201ENST00000616184 634 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 OR6C71P-202ENST00000641886 1107 ntBASIC3.38□□□□□ -1.87
PTP4A1Q93096 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTP4A1Q93096 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PTP4A1Q93096 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.38□□□□□ -1.87
PTP4A1Q93096 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.37□□□□□ -1.87
PTP4A1Q93096 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTP4A1Q93096 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTP4A1Q93096 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PTP4A1Q93096 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 Y_RNA.192-201ENST00000363977 102 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 RNU1-64P-201ENST00000365443 163 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 RNU6-636P-201ENST00000384598 107 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 RPL23AP29-201ENST00000397284 453 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 RSL24D1P1-201ENST00000404972 493 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 RPL7L1P10-201ENST00000427790 463 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 AC004975.1-201ENST00000428733 208 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.37□□□□□ -1.87
PTP4A1Q93096 RPL26P6-201ENST00000440913 438 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 RPL21P89-201ENST00000444021 467 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 AC006480.1-201ENST00000449887 378 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 SNORD121B-201ENST00000458838 81 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 AP002884.2-201ENST00000471647 395 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 RN7SL132P-201ENST00000478131 296 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 RPL31P60-201ENST00000478450 367 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 RPL30P5-201ENST00000494923 336 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 AC024589.1-201ENST00000512207 263 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC3.37□□□□□ -1.87
PTP4A1Q93096 OR8R1P-201ENST00000543943 764 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 AC008011.1-201ENST00000545989 227 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.37□□□□□ -1.87
PTP4A1Q93096 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.37□□□□□ -1.87
PTP4A1Q93096 AC023813.2-201ENST00000564321 469 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 AC120057.2-201ENST00000571520 271 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 MIR4738-201ENST00000579134 87 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 MIR3609-201ENST00000582661 80 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 AC093227.2-201ENST00000589357 285 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 MIR6500-201ENST00000622700 86 ntBASIC3.37□□□□□ -1.87
PTP4A1Q93096 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
PTP4A1Q93096 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTP4A1Q93096 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
PTP4A1Q93096 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PTP4A1Q93096 MIR372-201ENST00000362225 67 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 RNU6-1078P-201ENST00000364522 103 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 RNU6-283P-201ENST00000364788 107 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 RNA5SP283-201ENST00000365604 119 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 TPMTP3-201ENST00000411928 735 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 USP9YP33-201ENST00000412220 421 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 AC017079.2-201ENST00000416102 485 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 AC106883.1-201ENST00000418805 562 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 NANOGP5-201ENST00000424456 877 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 NDUFB1P1-201ENST00000435191 180 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 USP9YP35-201ENST00000435696 412 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 MTND2P24-201ENST00000453434 806 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 HSPE1P6-201ENST00000479457 291 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.36□□□□□ -1.87
PTP4A1Q93096 UBE2V1P12-201ENST00000503954 474 ntBASIC3.36□□□□□ -1.87
PTP4A1Q93096 AC010460.1-201ENST00000507087 466 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms