Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 RNU6-88P-201ENST00000606801 100 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC4.3□□□□□ -1.72
USP38Q8NB14 AC006329.2-201ENST00000611491 394 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AC122133.1-201ENST00000613964 233 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AC091931.1-201ENST00000623488 728 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AC040168.1-201ENST00000623594 991 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 EXOC5P1-201ENST00000510543 1969 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 MTND5P3-201ENST00000438536 1800 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
USP38Q8NB14 AC027287.1-201ENST00000553115 1453 ntBASIC4.3□□□□□ -1.72
USP38Q8NB14 AL356473.1-201ENST00000406203 1408 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 OR4G11P-202ENST00000642116 1414 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 AC011477.1-204ENST00000623416 1325 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 GNG5P1-201ENST00000255500 204 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 SNORD116-8-201ENST00000384365 95 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 MIR490-201ENST00000384865 128 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 U3.26-201ENST00000391236 204 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 RNU6ATAC10P-201ENST00000408635 111 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 RN7SKP56-201ENST00000410513 331 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 DNAJA1P2-201ENST00000421360 1197 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AL591419.1-201ENST00000427423 339 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AC083863.1-201ENST00000438811 231 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC4.29□□□□□ -1.72
USP38Q8NB14 BX322784.1-201ENST00000455793 1077 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 SYPL1P1-201ENST00000473622 768 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.29□□□□□ -1.72
USP38Q8NB14 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.29□□□□□ -1.72
USP38Q8NB14 LTV1P1-201ENST00000510683 1237 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AC010342.1-201ENST00000514047 877 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 RNU4-60P-201ENST00000517239 135 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AC087369.1-201ENST00000520775 996 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC4.29□□□□□ -1.72
USP38Q8NB14 AP003385.6-201ENST00000531603 374 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AC010653.1-201ENST00000571108 881 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 MIR4644-201ENST00000579929 84 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AL669831.4-202ENST00000590817 238 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AC020914.6-201ENST00000594327 272 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 Z99497.2-201ENST00000603634 310 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AL049634.3-201ENST00000604968 457 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC4.29□□□□□ -1.72
USP38Q8NB14 AC004009.2-201ENST00000623016 728 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
USP38Q8NB14 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
USP38Q8NB14 AC066616.2-201ENST00000559334 1481 ntBASIC4.29□□□□□ -1.72
USP38Q8NB14 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
USP38Q8NB14 LINC02471-203ENST00000641941 4752 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP38Q8NB14 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP38Q8NB14 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP38Q8NB14 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
USP38Q8NB14 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
USP38Q8NB14 RNU6-989P-201ENST00000362756 107 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 RNA5SP88-201ENST00000365560 109 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 RNU6-952P-201ENST00000391164 108 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 HMGB1P17-201ENST00000403495 628 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.28□□□□□ -1.72
USP38Q8NB14 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.28□□□□□ -1.72
USP38Q8NB14 HSFY4P-201ENST00000415994 1181 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 MTATP6P27-201ENST00000416987 621 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC4.28□□□□□ -1.72
USP38Q8NB14 AL139247.1-201ENST00000422768 325 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC096638.2-201ENST00000434965 711 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 RPL7P28-201ENST00000437739 740 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 SNRPEP7-201ENST00000438350 220 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 UBE2D3P4-201ENST00000441973 436 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.28□□□□□ -1.72
USP38Q8NB14 MTND2P22-201ENST00000444325 1033 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC4.28□□□□□ -1.72
USP38Q8NB14 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.28□□□□□ -1.72
USP38Q8NB14 AC093534.1-201ENST00000504977 132 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC4.28□□□□□ -1.72
USP38Q8NB14 AC004069.2-201ENST00000505438 1114 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.28□□□□□ -1.72
USP38Q8NB14 BTF3L4P4-201ENST00000506381 449 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 TMEM248P1-201ENST00000510579 951 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC010486.3-201ENST00000511602 785 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 MTND5P4-201ENST00000514978 288 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC087373.1-201ENST00000524920 491 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 OR7K1P-201ENST00000546439 926 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC007954.1-201ENST00000554198 494 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.28□□□□□ -1.72
USP38Q8NB14 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC4.28□□□□□ -1.72
USP38Q8NB14 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC4.28□□□□□ -1.72
USP38Q8NB14 AL355812.1-201ENST00000603215 216 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 DUXAP11-201ENST00000603858 526 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC011816.2-201ENST00000607089 556 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC024560.3-201ENST00000608482 349 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AC007494.3-201ENST00000624660 743 ntBASIC4.28□□□□□ -1.72
USP38Q8NB14 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 93.3 ms