Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 MTND5P4-201ENST00000514978 288 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 RNU6-1095P-201ENST00000516148 108 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 MIR2114-201ENST00000516645 80 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 SNORA31.20-201ENST00000517111 133 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC3.66□□□□□ -1.82
LDB1Q86U70 MTND2P38-201ENST00000522536 667 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 AC087276.1-201ENST00000529659 480 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 OR5AP1P-201ENST00000529730 940 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 AC109635.4-202ENST00000531666 412 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 AC018630.1-201ENST00000541376 925 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 AC106785.1-201ENST00000565935 262 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB1Q86U70 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB1Q86U70 AC025811.1-201ENST00000604312 472 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 VIS1.1-201ENST00000610517 203 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
LDB1Q86U70 AC119674.1-207ENST00000641355 633 ntBASIC3.66□□□□□ -1.82
LDB1Q86U70 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LDB1Q86U70 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
LDB1Q86U70 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.66□□□□□ -1.82
LDB1Q86U70 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
LDB1Q86U70 AP001350.1-201ENST00000601906 1524 ntBASIC3.65□□□□□ -1.82
LDB1Q86U70 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB1Q86U70 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LDB1Q86U70 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
LDB1Q86U70 RNU6-777P-201ENST00000364265 104 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 RNU1-64P-201ENST00000365443 163 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AL391417.1-201ENST00000404100 426 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 RN7SKP266-201ENST00000410232 287 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 RNU2-47P-201ENST00000410649 186 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 RPL23AP39-201ENST00000415533 405 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AL365203.2-201ENST00000423444 196 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.65□□□□□ -1.83
LDB1Q86U70 AL117351.1-201ENST00000438864 766 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.65□□□□□ -1.83
LDB1Q86U70 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB1Q86U70 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB1Q86U70 OR6C5P-201ENST00000452388 923 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 RPS24P6-201ENST00000452670 400 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 RNU7-125P-201ENST00000458760 62 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AC017015.1-201ENST00000477387 286 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LDB1Q86U70 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB1Q86U70 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC3.65□□□□□ -1.83
LDB1Q86U70 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.65□□□□□ -1.83
LDB1Q86U70 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.65□□□□□ -1.83
LDB1Q86U70 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.65□□□□□ -1.83
LDB1Q86U70 AL121766.1-201ENST00000547436 487 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 CR383656.7-201ENST00000548164 174 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AC007954.1-201ENST00000554198 494 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AL121576.1-201ENST00000556055 276 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AC141257.3-201ENST00000572906 215 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.65□□□□□ -1.83
LDB1Q86U70 KLKP1-201ENST00000595979 403 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 CLIC4P2-201ENST00000601934 717 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 DUXAP11-201ENST00000603858 526 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AC004223.4-201ENST00000612426 332 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AL603755.1-201ENST00000619504 163 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AP000676.3-201ENST00000623299 569 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 AC099063.3-201ENST00000642066 185 ntBASIC3.65□□□□□ -1.83
LDB1Q86U70 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.65□□□□□ -1.83
LDB1Q86U70 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
LDB1Q86U70 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LDB1Q86U70 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
LDB1Q86U70 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
LDB1Q86U70 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC3.65□□□□□ -1.83
LDB1Q86U70 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB1Q86U70 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDB1Q86U70 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB1Q86U70 AP001486.2-201ENST00000561652 5113 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDB1Q86U70 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDB1Q86U70 Y_RNA.169-201ENST00000363745 96 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 RNU6-283P-201ENST00000364788 107 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
LDB1Q86U70 AL445189.1-201ENST00000405722 338 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.64□□□□□ -1.83
LDB1Q86U70 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.64□□□□□ -1.83
LDB1Q86U70 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB1Q86U70 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.64□□□□□ -1.83
LDB1Q86U70 AL590103.1-201ENST00000434488 307 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 AL138799.3-201ENST00000438968 350 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC3.64□□□□□ -1.83
LDB1Q86U70 MTCO3P16-201ENST00000454456 754 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 AC010285.1-201ENST00000470580 392 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LDB1Q86U70 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB1Q86U70 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.64□□□□□ -1.83
LDB1Q86U70 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.64□□□□□ -1.83
LDB1Q86U70 RNU6-232P-201ENST00000517144 64 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 IGKV3OR22-2-201ENST00000517943 313 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC3.64□□□□□ -1.83
LDB1Q86U70 AC008489.1-201ENST00000524271 483 ntBASIC3.64□□□□□ -1.83
LDB1Q86U70 AC068587.4-201ENST00000533893 186 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms