Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 AC103710.2-201ENST00000609912 942 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
RC3H1Q5TC82 MTND5P6-201ENST00000422338 1798 ntBASIC6.59□□□□□ -1.35
RC3H1Q5TC82 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.36
RC3H1Q5TC82 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC100757.1-201ENST00000616872 1835 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 MAX-203ENST00000341653 330 ntTSL 2 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 RN7SKP186-201ENST00000365371 303 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 RNU6-317P-201ENST00000384031 107 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 Y_RNA.462-201ENST00000384268 102 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC011816.1-201ENST00000441346 546 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 Y_RNA.715-201ENST00000517082 110 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC008687.2-201ENST00000597865 520 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC083809.1-201ENST00000615051 472 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC103705.1-201ENST00000619013 241 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC011155.2-201ENST00000623202 216 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AL159972.1-201ENST00000625150 448 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 CDRT1-208ENST00000630868 794 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 U6.114-201ENST00000636407 96 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 AC068769.1-201ENST00000474767 2426 ntBASIC6.58□□□□□ -1.36
RC3H1Q5TC82 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
RC3H1Q5TC82 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AC015799.1-201ENST00000622996 3122 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 U3.11-201ENST00000364476 212 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 Y_RNA.276-201ENST00000364732 109 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 RNA5SP240-201ENST00000365355 128 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 RNU6-444P-201ENST00000383988 108 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 RNU6-886P-201ENST00000384319 105 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 PPIAP9-201ENST00000403866 498 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 RNA5SP113-201ENST00000410486 84 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 REREP1Y-201ENST00000422655 198 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 DNAJC19P7-201ENST00000428811 344 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 REREP2Y-201ENST00000439103 200 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 RPL23AP43-201ENST00000446445 471 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 TPT1P12-201ENST00000448968 492 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 CREM-226ENST00000469949 721 ntTSL 3 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AC009901.1-201ENST00000506703 541 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 RNU6-189P-201ENST00000516120 101 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 Y_RNA.703-201ENST00000516846 111 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 RNU1-54P-201ENST00000517181 120 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 IGKV2D-23-201ENST00000518179 286 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 HSPE1P20-201ENST00000538133 289 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 MIR3667-201ENST00000581025 74 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AC004792.1-201ENST00000614523 137 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AP001486.3-201ENST00000615334 372 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
RC3H1Q5TC82 MTCO1P24-201ENST00000515438 1558 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 TCP11X1-202ENST00000622971 1372 ntBASIC6.57□□□□□ -1.36
RC3H1Q5TC82 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
RC3H1Q5TC82 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms