Protein–RNA interactions for Protein: Q02223

TNFRSF17, Tumor necrosis factor receptor superfamily member 17, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF17Q02223 RPS7P13-201ENST00000413955 498 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC027644.1-201ENST00000419595 298 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 RPL7P30-201ENST00000420888 709 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 ATP5C1P1-201ENST00000441945 895 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AL121871.1-201ENST00000443413 436 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC244505.3-201ENST00000454598 187 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC091179.1-201ENST00000461606 579 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC087312.1-201ENST00000471411 480 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 RPL7P5-201ENST00000471472 736 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 OR10V3P-201ENST00000525712 725 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AP003066.2-201ENST00000529375 555 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 DNAJC8P1-201ENST00000554535 372 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC122134.1-202ENST00000569111 1201 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC008507.2-201ENST00000588402 1176 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC106791.2-201ENST00000604680 391 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC073657.2-201ENST00000605661 303 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AL583856.2-201ENST00000606298 543 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC019176.2-201ENST00000611579 315 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 uc_338.1-201ENST00000612113 180 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AL512427.1-201ENST00000618593 349 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC012314.7-201ENST00000619693 93 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 SRP72P2-201ENST00000344851 1979 ntBASIC3.12□□□□□ -1.91
TNFRSF17Q02223 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
TNFRSF17Q02223 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC233263.6-201ENST00000631132 1963 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 FAM35CP-201ENST00000554755 2470 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 RNU1-75P-201ENST00000347264 129 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 MIR7-3-201ENST00000384898 110 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 RNA5SP31-201ENST00000411144 127 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 RPF2P1-201ENST00000424137 906 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC097713.2-201ENST00000430199 356 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 CST9LP2-201ENST00000437612 320 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 Z82190.1-201ENST00000454534 490 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 HMGN1P18-201ENST00000457642 277 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC092185.1-201ENST00000491371 97 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 DYNLL1P6-201ENST00000503440 264 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 CBX3P3-201ENST00000508108 532 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 FAM60DP-201ENST00000524174 632 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 NCAPGP2-201ENST00000557911 754 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 RN7SL339P-201ENST00000580597 296 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC068620.3-201ENST00000602749 560 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AC091946.2-201ENST00000606105 291 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AP002826.1-201ENST00000608835 315 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AL157817.1-201ENST00000614264 790 ntBASIC3.11□□□□□ -1.91
TNFRSF17Q02223 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
TNFRSF17Q02223 AP002907.1-201ENST00000606361 1430 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 AC011460.1-201ENST00000636268 1834 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF17Q02223 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF17Q02223 RNU6-805P-201ENST00000365643 106 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF17Q02223 ARF4P3-201ENST00000397387 509 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 RNA5SP229-201ENST00000410809 99 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.1□□□□□ -1.91
TNFRSF17Q02223 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFRSF17Q02223 EZH2P1-201ENST00000431167 291 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFRSF17Q02223 HMGB3P11-201ENST00000440127 604 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 PRDX3P3-201ENST00000447765 522 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 Z99127.3-201ENST00000448158 395 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 COX6CP18-201ENST00000448769 222 ntBASIC3.1□□□□□ -1.91
TNFRSF17Q02223 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TNFRSF17Q02223 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.1□□□□□ -1.91
TNFRSF17Q02223 AC104629.1-201ENST00000494226 508 ntBASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms