Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC012181.1-201ENST00000479895 423 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC108078.3-201ENST00000502633 489 ntBASIC3.61□□□□□ -1.83
CDH3P22223 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.61□□□□□ -1.83
CDH3P22223 OR5H5P-201ENST00000503164 928 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH3P22223 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH3P22223 SLC25A15P5-201ENST00000508033 253 ntBASIC3.61□□□□□ -1.83
CDH3P22223 XKRY-201ENST00000510392 1100 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH3P22223 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
CDH3P22223 MRPS33P3-201ENST00000513456 322 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC119751.5-201ENST00000514077 770 ntBASIC3.61□□□□□ -1.83
CDH3P22223 RNA5SP208-201ENST00000516156 78 ntBASIC3.61□□□□□ -1.83
CDH3P22223 RNU1-95P-201ENST00000516357 160 ntBASIC3.61□□□□□ -1.83
CDH3P22223 RN7SKP83-201ENST00000516512 178 ntBASIC3.61□□□□□ -1.83
CDH3P22223 RNU1-128P-201ENST00000516704 160 ntBASIC3.61□□□□□ -1.83
CDH3P22223 RN7SKP289-201ENST00000517244 295 ntBASIC3.61□□□□□ -1.83
CDH3P22223 DEFB131D-201ENST00000526803 184 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AL139174.1-201ENST00000531489 886 ntBASIC3.61□□□□□ -1.83
CDH3P22223 UBE2NP1-201ENST00000545592 458 ntBASIC3.61□□□□□ -1.83
CDH3P22223 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH3P22223 ELOCP32-201ENST00000548625 324 ntBASIC3.61□□□□□ -1.83
CDH3P22223 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.61□□□□□ -1.83
CDH3P22223 CYCSP2-201ENST00000558168 301 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC090877.1-201ENST00000561418 344 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH3P22223 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH3P22223 AC002400.1-201ENST00000569310 726 ntBASIC3.61□□□□□ -1.83
CDH3P22223 MIR4637-201ENST00000582405 84 ntBASIC3.61□□□□□ -1.83
CDH3P22223 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH3P22223 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH3P22223 AL137849.1-201ENST00000604767 169 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AL009028.1-201ENST00000604895 802 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC124312.4-201ENST00000605533 310 ntBASIC3.61□□□□□ -1.83
CDH3P22223 SNORA62.6-201ENST00000606322 83 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH3P22223 AL513477.2-201ENST00000607858 568 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.61□□□□□ -1.83
CDH3P22223 AL392048.1-201ENST00000613946 534 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AL136981.2-201ENST00000617319 734 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AL607023.1-201ENST00000620045 248 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AP000676.3-201ENST00000623299 569 ntBASIC3.61□□□□□ -1.83
CDH3P22223 AC244517.5-201ENST00000624139 722 ntTSL 3 BASIC3.61□□□□□ -1.83
CDH3P22223 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH3P22223 AL034408.1-202ENST00000636088 415 ntBASIC3.61□□□□□ -1.83
CDH3P22223 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH3P22223 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.61□□□□□ -1.83
CDH3P22223 AC118273.1-201ENST00000525324 3006 ntBASIC3.61□□□□□ -1.83
CDH3P22223 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDH3P22223 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH3P22223 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH3P22223 MTCO1P23-201ENST00000415223 1526 ntBASIC3.6□□□□□ -1.83
CDH3P22223 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
CDH3P22223 AC002546.1-201ENST00000588041 2504 ntBASIC3.6□□□□□ -1.83
CDH3P22223 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH3P22223 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDH3P22223 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.6□□□□□ -1.83
CDH3P22223 SNORA5A-201ENST00000384111 134 ntBASIC3.6□□□□□ -1.83
CDH3P22223 HLFP1-201ENST00000402375 499 ntBASIC3.6□□□□□ -1.83
CDH3P22223 USP9YP33-201ENST00000412220 421 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH3P22223 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH3P22223 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH3P22223 MTCYBP38-201ENST00000417160 1123 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH3P22223 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH3P22223 AC098592.1-201ENST00000419352 333 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH3P22223 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH3P22223 AL022400.1-201ENST00000423946 935 ntBASIC3.6□□□□□ -1.83
CDH3P22223 RPL21P66-201ENST00000426566 466 ntBASIC3.6□□□□□ -1.83
CDH3P22223 TXNL1P1-201ENST00000429528 554 ntBASIC3.6□□□□□ -1.83
CDH3P22223 USP9YP35-201ENST00000435696 412 ntBASIC3.6□□□□□ -1.83
CDH3P22223 UBE2D3P1-201ENST00000436669 444 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH3P22223 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.6□□□□□ -1.83
CDH3P22223 AC098824.1-201ENST00000453565 980 ntBASIC3.6□□□□□ -1.83
CDH3P22223 U3.44-201ENST00000458938 192 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AC026410.2-201ENST00000460281 156 ntBASIC3.6□□□□□ -1.83
CDH3P22223 PLGLA-201ENST00000465668 449 ntBASIC3.6□□□□□ -1.83
CDH3P22223 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH3P22223 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH3P22223 TMEM251P1-201ENST00000503717 318 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AC093767.1-201ENST00000504523 156 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AC010486.2-201ENST00000505572 483 ntBASIC3.6□□□□□ -1.83
CDH3P22223 PHBP14-201ENST00000512887 367 ntBASIC3.6□□□□□ -1.83
CDH3P22223 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.6□□□□□ -1.83
CDH3P22223 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.6□□□□□ -1.83
CDH3P22223 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH3P22223 AL163153.1-201ENST00000554223 283 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH3P22223 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.6□□□□□ -1.83
CDH3P22223 BNIP3P24-201ENST00000593398 557 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AC106791.2-201ENST00000604680 391 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AL133507.1-201ENST00000605269 557 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AL161912.2-201ENST00000565707 3007 ntBASIC3.6□□□□□ -1.83
CDH3P22223 AP002907.1-201ENST00000606361 1430 ntBASIC3.6□□□□□ -1.83
CDH3P22223 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDH3P22223 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms