Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 AC060766.3-201ENST00000591442 263 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
COL1A1P02452 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC2.7□□□□□ -1.98
COL1A1P02452 U6.98-201ENST00000637157 84 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 AF127577.6-201ENST00000623352 2191 ntBASIC2.7□□□□□ -1.98
COL1A1P02452 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL1A1P02452 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.69□□□□□ -1.98
COL1A1P02452 GSTA9P-201ENST00000406231 611 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.69□□□□□ -1.98
COL1A1P02452 AC106872.3-201ENST00000495104 446 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 AC005912.1-201ENST00000495392 255 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 MTND4P2-201ENST00000507767 1203 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 RNU2-58P-201ENST00000516403 183 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 RNU6-826P-201ENST00000516827 104 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 AC018630.1-201ENST00000541376 925 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 C1GALT1P1-201ENST00000548895 1089 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 AC135628.1-201ENST00000568867 534 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.69□□□□□ -1.98
COL1A1P02452 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.69□□□□□ -1.98
COL1A1P02452 AP000942.3-201ENST00000603702 160 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 CR589904.2-201ENST00000612533 440 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 VN1R7P-201ENST00000619242 903 ntBASIC2.69□□□□□ -1.98
COL1A1P02452 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL1A1P02452 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
COL1A1P02452 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
COL1A1P02452 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.68□□□□□ -1.98
COL1A1P02452 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.68□□□□□ -1.98
COL1A1P02452 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
COL1A1P02452 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC2.68□□□□□ -1.98
COL1A1P02452 AL354719.1-201ENST00000406535 843 ntBASIC2.68□□□□□ -1.98
COL1A1P02452 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC2.68□□□□□ -1.98
COL1A1P02452 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.68□□□□□ -1.98
COL1A1P02452 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.68□□□□□ -1.98
COL1A1P02452 SNRPGP3-201ENST00000469405 227 ntBASIC2.68□□□□□ -1.98
COL1A1P02452 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC2.68□□□□□ -1.98
COL1A1P02452 OR5BN1P-201ENST00000532955 829 ntBASIC2.68□□□□□ -1.98
COL1A1P02452 MIR4498-201ENST00000577599 66 ntBASIC2.68□□□□□ -1.98
COL1A1P02452 AP003117.2-201ENST00000606010 545 ntBASIC2.68□□□□□ -1.98
COL1A1P02452 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.68□□□□□ -1.98
COL1A1P02452 AK6-205ENST00000618980 483 ntTSL 2 BASIC2.68□□□□□ -1.98
COL1A1P02452 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
COL1A1P02452 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC2.68□□□□□ -1.98
COL1A1P02452 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC2.68□□□□□ -1.98
COL1A1P02452 MTND5P7-201ENST00000413558 1798 ntBASIC2.68□□□□□ -1.98
COL1A1P02452 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
COL1A1P02452 Y_RNA.355-201ENST00000365462 98 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 RNA5SP88-201ENST00000365560 109 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 RNU1-138P-201ENST00000384093 164 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 MIR489-201ENST00000384923 84 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 HSPE1P26-201ENST00000405341 275 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 RN7SKP32-201ENST00000410167 303 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 Y_RNA.595-201ENST00000410403 105 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 RPL23AP36-201ENST00000413895 458 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC2.67□□□□□ -1.98
COL1A1P02452 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC2.67□□□□□ -1.98
COL1A1P02452 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
COL1A1P02452 RPL7P52-201ENST00000449200 742 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A1P02452 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC2.67□□□□□ -1.98
COL1A1P02452 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A1P02452 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.67□□□□□ -1.98
COL1A1P02452 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.67□□□□□ -1.98
COL1A1P02452 AP001180.3-201ENST00000582221 145 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 MAGOH2P-202ENST00000584384 429 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.67□□□□□ -1.98
COL1A1P02452 AC009570.1-201ENST00000609599 745 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 AC009318.2-201ENST00000610917 651 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 AL137847.3-201ENST00000611521 109 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 AC009831.4-201ENST00000620744 325 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 MIR4278-201ENST00000636094 69 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 MIR219B-201ENST00000637023 88 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 AC138649.5-201ENST00000637456 137 ntBASIC2.67□□□□□ -1.98
COL1A1P02452 NSRP1P1-201ENST00000444067 1693 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.66□□□□□ -1.98
COL1A1P02452 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC2.66□□□□□ -1.98
COL1A1P02452 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
COL1A1P02452 RNU6-1159P-201ENST00000362933 107 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 MT-TP-201ENST00000387461 68 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 RNU2-2P-201ENST00000410396 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 AL139156.1-201ENST00000412785 841 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 UBE2V2P1-201ENST00000434717 398 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 AC091179.1-201ENST00000461606 579 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.66□□□□□ -1.98
COL1A1P02452 RNA5SP200-201ENST00000516360 103 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 SCARNA16.3-201ENST00000516595 184 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 AC007620.3-201ENST00000608131 497 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 AL451074.6-201ENST00000608512 729 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.15-201ENST00000611544 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.16-201ENST00000613119 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.12-201ENST00000613778 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.20-201ENST00000613956 192 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.9-201ENST00000615427 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.11-201ENST00000616345 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.2-201ENST00000616535 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.3-201ENST00000617785 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.19-201ENST00000618602 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 RNU2-1-201ENST00000618664 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 U2.6-201ENST00000619225 191 ntBASIC2.66□□□□□ -1.98
COL1A1P02452 AC010378.1-201ENST00000619270 362 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms