Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK2O43353 AC245052.5-201ENST00000416320 649 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK2O43353 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK2O43353 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK2O43353 AC234781.2-201ENST00000426370 994 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 NDUFB4P6-201ENST00000436819 366 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC3.2□□□□□ -1.9
RIPK2O43353 AC092641.1-201ENST00000440229 772 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK2O43353 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK2O43353 RPS17P11-201ENST00000474297 293 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AC106707.2-201ENST00000484182 374 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 MTND3P3-201ENST00000505004 126 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK2O43353 RNU1-95P-201ENST00000516357 160 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 RNU1-128P-201ENST00000516704 160 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 SNORA31.26-201ENST00000517250 137 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 DEFB108D-201ENST00000527787 222 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK2O43353 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.2□□□□□ -1.9
RIPK2O43353 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.2□□□□□ -1.9
RIPK2O43353 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC3.2□□□□□ -1.9
RIPK2O43353 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.2□□□□□ -1.9
RIPK2O43353 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK2O43353 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC3.2□□□□□ -1.9
RIPK2O43353 MIR4276-201ENST00000584832 70 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AC096947.1-201ENST00000603233 470 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 HSPE1P7-201ENST00000604681 321 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AC097504.2-201ENST00000608088 454 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AP000238.1-201ENST00000608759 426 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AP005137.2-201ENST00000609238 400 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AL121772.2-201ENST00000614331 297 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK2O43353 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK2O43353 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.2□□□□□ -1.9
RIPK2O43353 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
RIPK2O43353 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RIPK2O43353 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
RIPK2O43353 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RIPK2O43353 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK2O43353 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.2□□□□□ -1.9
RIPK2O43353 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
RIPK2O43353 ZNF285B-201ENST00000561698 1767 ntBASIC3.2□□□□□ -1.9
RIPK2O43353 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
RIPK2O43353 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
RIPK2O43353 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.19□□□□□ -1.9
RIPK2O43353 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.19□□□□□ -1.9
RIPK2O43353 AC008568.2-201ENST00000623862 2313 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AL359837.1-201ENST00000381357 287 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.19□□□□□ -1.9
RIPK2O43353 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.19□□□□□ -1.9
RIPK2O43353 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 C4BPAP2-201ENST00000428434 478 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 RPL23AP69-201ENST00000431134 458 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.19□□□□□ -1.9
RIPK2O43353 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.19□□□□□ -1.9
RIPK2O43353 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.19□□□□□ -1.9
RIPK2O43353 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC3.19□□□□□ -1.9
RIPK2O43353 RPL21P23-201ENST00000446654 460 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 RPL26P28-201ENST00000451325 435 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 ELOCP23-201ENST00000452014 332 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 MTND2P39-201ENST00000457230 764 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AC104164.3-201ENST00000467363 1258 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 RPL21P18-201ENST00000469899 480 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 RN7SL601P-201ENST00000471221 293 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AP004217.1-201ENST00000480579 346 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 DYNLL1P6-201ENST00000503440 264 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 VN1R104P-201ENST00000505115 1009 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AC021678.1-201ENST00000505195 936 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.19□□□□□ -1.9
RIPK2O43353 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.19□□□□□ -1.9
RIPK2O43353 OR5AK1P-201ENST00000524837 922 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC3.19□□□□□ -1.9
RIPK2O43353 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC3.19□□□□□ -1.9
RIPK2O43353 HIGD1AP1-201ENST00000550979 275 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 RPL21P12-201ENST00000559810 515 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 MIR3921-201ENST00000577308 85 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 MIR3609-201ENST00000582661 80 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 BNIP3P24-201ENST00000593398 557 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AC013444.2-201ENST00000603317 787 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AC067959.1-201ENST00000604334 379 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AL031176.1-201ENST00000604554 466 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AC091946.2-201ENST00000606105 291 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AC092953.2-201ENST00000608000 699 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 AC243312.2-201ENST00000623340 601 ntBASIC3.19□□□□□ -1.9
RIPK2O43353 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.19□□□□□ -1.9
RIPK2O43353 ZNF883-201ENST00000619044 2051 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
RIPK2O43353 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
RIPK2O43353 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
RIPK2O43353 SNORA5A-201ENST00000384111 134 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 RNU6-207P-201ENST00000384137 107 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 RPL22P22-201ENST00000395439 379 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AC025750.1-201ENST00000399891 379 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 MIR1290-201ENST00000408735 78 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 RAB28P1-201ENST00000411517 641 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.18□□□□□ -1.9
RIPK2O43353 HMGN1P24-201ENST00000412282 298 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 BMS1P22-201ENST00000414726 313 ntBASIC3.18□□□□□ -1.9
RIPK2O43353 ZDHHC20P2-201ENST00000424108 429 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms