Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC009318.3-201ENST00000616916 503 ntBASIC4.29□□□□□ -1.72
CUX2O14529 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.29□□□□□ -1.72
CUX2O14529 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
CUX2O14529 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.28□□□□□ -1.72
CUX2O14529 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CUX2O14529 SNORA62.2-201ENST00000364672 152 ntBASIC4.28□□□□□ -1.72
CUX2O14529 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CUX2O14529 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.28□□□□□ -1.72
CUX2O14529 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC4.28□□□□□ -1.72
CUX2O14529 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC4.28□□□□□ -1.72
CUX2O14529 AL357520.1-201ENST00000441557 453 ntBASIC4.28□□□□□ -1.72
CUX2O14529 AL731537.2-201ENST00000561565 951 ntBASIC4.28□□□□□ -1.72
CUX2O14529 MIR3186-201ENST00000577404 85 ntBASIC4.28□□□□□ -1.72
CUX2O14529 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.28□□□□□ -1.72
CUX2O14529 MIR1264-201ENST00000616374 69 ntBASIC4.28□□□□□ -1.72
CUX2O14529 HMGB1P13-201ENST00000406019 642 ntBASIC4.27□□□□□ -1.73
CUX2O14529 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CUX2O14529 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC4.27□□□□□ -1.73
CUX2O14529 MTCO3P4-201ENST00000419236 787 ntBASIC4.27□□□□□ -1.73
CUX2O14529 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC4.27□□□□□ -1.73
CUX2O14529 RGS4-209ENST00000531057 544 ntTSL 4 BASIC4.27□□□□□ -1.73
CUX2O14529 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CUX2O14529 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC4.27□□□□□ -1.73
CUX2O14529 PDCD5P1-201ENST00000543528 309 ntBASIC4.27□□□□□ -1.73
CUX2O14529 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.27□□□□□ -1.73
CUX2O14529 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.27□□□□□ -1.73
CUX2O14529 AC040174.2-201ENST00000602701 465 ntBASIC4.27□□□□□ -1.73
CUX2O14529 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CUX2O14529 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.27□□□□□ -1.73
CUX2O14529 MTND5P28-201ENST00000438005 1594 ntBASIC4.27□□□□□ -1.73
CUX2O14529 AC026241.1-201ENST00000517873 2142 ntBASIC4.27□□□□□ -1.73
CUX2O14529 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CUX2O14529 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CUX2O14529 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CUX2O14529 TAF9BP2-201ENST00000400856 499 ntBASIC4.26□□□□□ -1.73
CUX2O14529 FGF7P8-201ENST00000402994 292 ntBASIC4.26□□□□□ -1.73
CUX2O14529 Z98742.2-201ENST00000431564 187 ntBASIC4.26□□□□□ -1.73
CUX2O14529 BTBD7P2-201ENST00000441962 620 ntBASIC4.26□□□□□ -1.73
CUX2O14529 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.26□□□□□ -1.73
CUX2O14529 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.26□□□□□ -1.73
CUX2O14529 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.26□□□□□ -1.73
CUX2O14529 AC100870.1-201ENST00000522035 505 ntBASIC4.26□□□□□ -1.73
CUX2O14529 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.26□□□□□ -1.73
CUX2O14529 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.26□□□□□ -1.73
CUX2O14529 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.26□□□□□ -1.73
CUX2O14529 AC025918.2-201ENST00000558683 763 ntBASIC4.26□□□□□ -1.73
CUX2O14529 AC233266.2-201ENST00000567067 528 ntBASIC4.26□□□□□ -1.73
CUX2O14529 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CUX2O14529 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC4.26□□□□□ -1.73
CUX2O14529 MIR7973-1-201ENST00000614683 76 ntBASIC4.26□□□□□ -1.73
CUX2O14529 AC116563.2-201ENST00000624751 535 ntBASIC4.26□□□□□ -1.73
CUX2O14529 TMEM161BP1-201ENST00000457388 1457 ntBASIC4.26□□□□□ -1.73
CUX2O14529 ZNF355P-201ENST00000427301 3216 ntBASIC4.26□□□□□ -1.73
CUX2O14529 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
CUX2O14529 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.26□□□□□ -1.73
CUX2O14529 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
CUX2O14529 SEC63P1-201ENST00000425785 1258 ntBASIC4.25□□□□□ -1.73
CUX2O14529 MED6P1-201ENST00000439659 713 ntBASIC4.25□□□□□ -1.73
CUX2O14529 AC025459.1-201ENST00000504072 156 ntBASIC4.25□□□□□ -1.73
CUX2O14529 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.25□□□□□ -1.73
CUX2O14529 RNA5SP76-201ENST00000516277 87 ntBASIC4.25□□□□□ -1.73
CUX2O14529 AP000857.1-201ENST00000532151 543 ntBASIC4.25□□□□□ -1.73
CUX2O14529 AC128657.1-201ENST00000549459 145 ntBASIC4.25□□□□□ -1.73
CUX2O14529 SNRPGP1-201ENST00000553864 222 ntBASIC4.25□□□□□ -1.73
CUX2O14529 AL355836.1-201ENST00000555951 870 ntBASIC4.25□□□□□ -1.73
CUX2O14529 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC4.25□□□□□ -1.73
CUX2O14529 CBX3P2-202ENST00000583365 535 ntBASIC4.25□□□□□ -1.73
CUX2O14529 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.25□□□□□ -1.73
CUX2O14529 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC4.25□□□□□ -1.73
CUX2O14529 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CUX2O14529 CUL1P1-201ENST00000509510 2425 ntBASIC4.24□□□□□ -1.73
CUX2O14529 RNA5SP88-201ENST00000365560 109 ntBASIC4.24□□□□□ -1.73
CUX2O14529 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CUX2O14529 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CUX2O14529 AC010385.1-201ENST00000412374 256 ntBASIC4.24□□□□□ -1.73
CUX2O14529 MTND4P11-201ENST00000417020 1058 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.24□□□□□ -1.73
CUX2O14529 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CUX2O14529 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.24□□□□□ -1.73
CUX2O14529 RN7SL283P-201ENST00000489055 303 ntBASIC4.24□□□□□ -1.73
CUX2O14529 SNORA9.3-201ENST00000516383 129 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC4.24□□□□□ -1.73
CUX2O14529 HAUS1P3-201ENST00000523909 662 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AGGF1P8-201ENST00000562979 1000 ntBASIC4.24□□□□□ -1.73
CUX2O14529 MIR4512-201ENST00000583257 77 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AC083760.1-201ENST00000589621 670 ntBASIC4.24□□□□□ -1.73
CUX2O14529 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.24□□□□□ -1.73
CUX2O14529 AC107308.1-201ENST00000615897 301 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AC025016.1-201ENST00000616746 682 ntBASIC4.24□□□□□ -1.73
CUX2O14529 MTND4P21-201ENST00000453886 1357 ntBASIC4.24□□□□□ -1.73
CUX2O14529 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CUX2O14529 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.24□□□□□ -1.73
CUX2O14529 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.24□□□□□ -1.73
CUX2O14529 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC4.24□□□□□ -1.73
CUX2O14529 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CUX2O14529 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
CUX2O14529 AL513321.1-201ENST00000441175 761 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AL592437.1-201ENST00000443781 492 ntBASIC4.24□□□□□ -1.73
CUX2O14529 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.24□□□□□ -1.73
CUX2O14529 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms