Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC073109.1-201ENST00000445066 978 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 USP9YP23-201ENST00000455085 407 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 CYCSP34-201ENST00000458172 304 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC020890.1-201ENST00000491837 504 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC008638.1-201ENST00000506035 866 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 RNU6-264P-201ENST00000517134 104 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC135001.1-201ENST00000544546 283 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC026826.3-201ENST00000561747 158 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 TVP23CP2-201ENST00000571473 623 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 MIR3154-201ENST00000577829 84 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 RNF138P2-201ENST00000603490 592 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 MIR6774-201ENST00000614651 70 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AC123768.4-201ENST00000616244 701 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 Z69720.2-201ENST00000624755 279 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 AL669831.3-213ENST00000636676 183 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSU72Q9NP77 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 AL049641.1-201ENST00000441055 1948 ntBASIC5.17□□□□□ -1.58
SSU72Q9NP77 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSU72Q9NP77 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
SSU72Q9NP77 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
SSU72Q9NP77 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL442128.2-201ENST00000620246 1824 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 SMG1P4-204ENST00000523028 4131 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 RN7SKP184-201ENST00000362348 333 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 Y_RNA.463-201ENST00000384271 102 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 Y_RNA.527-201ENST00000384573 102 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 RNU6-1222P-201ENST00000384615 107 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 Z93019.1-201ENST00000416450 973 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL662874.1-201ENST00000426065 230 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 RPL36AP6-201ENST00000435770 321 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC005094.1-201ENST00000440420 368 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC243772.1-201ENST00000451620 410 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC104634.1-201ENST00000452720 462 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC006967.1-201ENST00000467608 589 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC012123.2-201ENST00000485809 248 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 RN7SL346P-201ENST00000491561 294 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC104806.1-201ENST00000508720 308 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 MEPE-206ENST00000511670 550 ntTSL 4 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 RNA5SP249-201ENST00000516127 99 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC012443.1-201ENST00000605605 231 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL627230.1-201ENST00000613077 211 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 FAM157A-202ENST00000615155 405 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL355365.1-201ENST00000616480 294 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AC132068.1-201ENST00000623805 459 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL353662.3-201ENST00000625131 237 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 ZNF734P-201ENST00000419494 1534 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
SSU72Q9NP77 AL122126.1-201ENST00000546905 1318 ntBASIC5.16□□□□□ -1.58
SSU72Q9NP77 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
SSU72Q9NP77 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.58
SSU72Q9NP77 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
SSU72Q9NP77 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
SSU72Q9NP77 AC005005.4-201ENST00000623789 16698 ntBASIC5.15□□□□□ -1.58
SSU72Q9NP77 MFF-206ENST00000392059 1710 ntTSL 5 BASIC5.15□□□□□ -1.58
SSU72Q9NP77 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.15□□□□□ -1.58
SSU72Q9NP77 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
SSU72Q9NP77 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
SSU72Q9NP77 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 Y_RNA.149-201ENST00000363558 117 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 RNU1-130P-201ENST00000363930 160 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 RNA5SP433-201ENST00000364491 114 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
SSU72Q9NP77 RNU6-550P-201ENST00000391057 101 ntBASIC5.15□□□□□ -1.59
SSU72Q9NP77 AL445189.1-201ENST00000405722 338 ntBASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms