Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 RN7SKP18-201ENST00000516005 275 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 RNU1-95P-201ENST00000516357 160 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 RNU1-128P-201ENST00000516704 160 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 RANP9-201ENST00000519957 271 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 AC008489.1-201ENST00000524271 483 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 MTND3P13-201ENST00000574391 343 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 AC020914.6-201ENST00000594327 272 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 AC106791.2-201ENST00000604680 391 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 AC092354.2-201ENST00000607786 514 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 AP000553.6-201ENST00000641242 118 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 ZNF962P-201ENST00000443465 3140 ntBASIC4.79□□□□□ -1.64
CHMP4AQ9BY43 DDX43P2-201ENST00000604753 1354 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AC091564.4-201ENST00000533934 2194 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 RNU6-799P-201ENST00000363567 107 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 RNU6-621P-201ENST00000364752 109 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 U8.11-201ENST00000384699 133 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 U8.12-201ENST00000384701 133 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 MIR449B-201ENST00000384995 97 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 SNORA48.7-201ENST00000391302 135 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 TPMTP3-201ENST00000411928 735 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 OFD1P7Y-201ENST00000454643 1155 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 SNORA84-201ENST00000459229 133 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 U8.18-201ENST00000459285 133 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AC104563.1-201ENST00000476147 376 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AC068724.1-201ENST00000487100 792 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 RAC1P2-201ENST00000511164 579 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AC109445.1-201ENST00000512356 383 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AC093677.1-201ENST00000514414 678 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 SNORA67.7-201ENST00000516664 135 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 OR7K1P-201ENST00000546439 926 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 MIR3609-201ENST00000582661 80 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AL390208.1-201ENST00000605885 644 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 MIR7851-201ENST00000610611 160 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AL121772.2-201ENST00000614331 297 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 AC099786.3-201ENST00000565735 1410 ntBASIC4.78□□□□□ -1.64
CHMP4AQ9BY43 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 RNU6-1197P-201ENST00000391183 107 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC068533.2-201ENST00000411872 306 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 RAB9AP3-201ENST00000412737 573 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 BX842559.1-201ENST00000419615 532 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 TXNP1-201ENST00000441872 371 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC010655.1-201ENST00000449336 292 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 RAB9AP1-201ENST00000449393 573 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 snoU109.3-201ENST00000459477 145 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 RPS26P15-201ENST00000488067 348 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC004069.2-201ENST00000505438 1114 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC114322.1-201ENST00000506771 926 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC008739.3-201ENST00000603262 127 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AL133393.1-201ENST00000603277 287 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 HMGB1P50-201ENST00000605814 607 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC006133.1-201ENST00000617106 264 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC039056.2-201ENST00000622261 511 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC231657.1-201ENST00000624313 397 ntBASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.77□□□□□ -1.65
CHMP4AQ9BY43 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AL161781.1-201ENST00000354277 403 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 SNORD116-12-201ENST00000384468 92 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 ATP5A1P2-201ENST00000412323 255 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AL035423.1-201ENST00000420331 213 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AC104472.2-201ENST00000469035 601 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 TRMT10BP1-201ENST00000519377 943 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AADACP1-206ENST00000561502 1193 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AC009712.1-201ENST00000564938 316 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 RPL23AP84-201ENST00000571193 464 ntBASIC4.76□□□□□ -1.65
CHMP4AQ9BY43 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.76□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms