Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 AC096664.2-201ENST00000411843 406 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 RPL32P35-201ENST00000415214 394 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC006960.1-201ENST00000419980 153 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 HMGB3P11-201ENST00000440127 604 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 NDUFAF4P2-201ENST00000445374 520 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 RPL21P39-201ENST00000463605 483 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC104472.2-201ENST00000469035 601 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC011979.1-201ENST00000472300 483 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 RPS29P2-201ENST00000479278 136 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 RPL21P93-201ENST00000480465 489 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC233702.1-201ENST00000482905 502 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC087190.1-201ENST00000484462 480 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC093591.1-201ENST00000491435 481 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC006445.1-201ENST00000491925 405 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 RPL21P16-201ENST00000495531 483 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC096751.1-202ENST00000502691 1067 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC010468.3-201ENST00000508225 458 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 KLHL2P1-201ENST00000508691 521 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC026412.2-201ENST00000512270 1075 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 RNU6-56P-201ENST00000516986 93 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 PSMA2P1-201ENST00000526365 646 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 SNRPGP16-201ENST00000533275 226 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 OSBPL9P3-201ENST00000534523 595 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AL020997.3-201ENST00000602843 359 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AC111188.2-201ENST00000529697 1387 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 TEX30-201ENST00000376019 1689 ntTSL 2 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 AL136520.1-201ENST00000600311 1322 ntBASIC2.17□□□□□ -2.06
UPK3BQ9BT76 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.17□□□□□ -2.06
UPK3BQ9BT76 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 SNORD15B-201ENST00000384714 146 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 MIR23A-201ENST00000385245 73 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AL138885.1-201ENST00000405921 675 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 UBE2V1P15-201ENST00000407776 448 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC115115.1-201ENST00000449927 248 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 RPL23AP31-201ENST00000456160 467 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 TPRKBP1-201ENST00000456243 481 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 TRBV26-201ENST00000456572 344 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 PRDX3P4-201ENST00000470828 747 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 VPS26AP1-201ENST00000483197 979 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 UBE2Q2P9-201ENST00000490086 202 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC011352.3-201ENST00000505162 593 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC098799.2-201ENST00000509466 868 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 SNORA31.1-201ENST00000515993 133 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 SNORA31.5-201ENST00000516190 133 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AP001804.3-201ENST00000525146 880 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC018630.1-201ENST00000541376 925 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 H3F3AP1-201ENST00000559984 334 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 MTCO3P13-201ENST00000577757 781 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC005000.2-201ENST00000605468 310 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AL359198.2-201ENST00000611836 194 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC099506.2-201ENST00000623074 221 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AP002907.1-201ENST00000606361 1430 ntBASIC2.16□□□□□ -2.06
UPK3BQ9BT76 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC2.15□□□□□ -2.06
UPK3BQ9BT76 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
UPK3BQ9BT76 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.15□□□□□ -2.06
UPK3BQ9BT76 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC2.15□□□□□ -2.07
UPK3BQ9BT76 RPL23AP57-201ENST00000332361 466 ntBASIC2.15□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms