Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 TRIM60P13-201ENST00000432350 1283 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.13□□□□□ -2.07
TTC28Q96AY4 AP000857.1-201ENST00000532151 543 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.13□□□□□ -2.07
TTC28Q96AY4 CU459211.1-201ENST00000635667 749 ntBASIC2.13□□□□□ -2.07
TTC28Q96AY4 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TTC28Q96AY4 AL391987.6-201ENST00000305671 199 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 RNA5SP383-201ENST00000362934 120 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 OR6C64P-201ENST00000419708 825 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 HMGB1P27-201ENST00000431429 603 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 RPS24P8-201ENST00000431490 402 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TTC28Q96AY4 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.12□□□□□ -2.07
TTC28Q96AY4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.12□□□□□ -2.07
TTC28Q96AY4 BX322784.1-201ENST00000455793 1077 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.12□□□□□ -2.07
TTC28Q96AY4 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.12□□□□□ -2.07
TTC28Q96AY4 AC141257.3-201ENST00000572906 215 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
TTC28Q96AY4 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.12□□□□□ -2.07
TTC28Q96AY4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.12□□□□□ -2.07
TTC28Q96AY4 AC002553.2-201ENST00000453217 340 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 AC147055.1-201ENST00000509261 750 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 HIGD1AP10-201ENST00000527837 282 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 AC073869.7-201ENST00000640874 297 ntBASIC2.12□□□□□ -2.07
TTC28Q96AY4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
TTC28Q96AY4 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
TTC28Q96AY4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.11□□□□□ -2.07
TTC28Q96AY4 AC012078.1-201ENST00000405035 1646 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 PPIAP17-201ENST00000438507 471 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.11□□□□□ -2.07
TTC28Q96AY4 RPL21P71-201ENST00000465598 459 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 AL122125.1-201ENST00000616999 600 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 AC000123.3-201ENST00000624029 4975 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
TTC28Q96AY4 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.11□□□□□ -2.07
TTC28Q96AY4 AL138878.1-201ENST00000405131 347 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 Z98941.1-201ENST00000407764 100 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC2.11□□□□□ -2.07
TTC28Q96AY4 AL513321.1-201ENST00000441175 761 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.11□□□□□ -2.07
TTC28Q96AY4 HAR1A.1-201ENST00000459583 118 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC2.11□□□□□ -2.07
TTC28Q96AY4 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC2.11□□□□□ -2.07
TTC28Q96AY4 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.11□□□□□ -2.07
TTC28Q96AY4 AC009831.4-201ENST00000620744 325 ntBASIC2.11□□□□□ -2.07
TTC28Q96AY4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
TTC28Q96AY4 UBE2V1P6-201ENST00000430840 422 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.1□□□□□ -2.07
TTC28Q96AY4 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC2.1□□□□□ -2.07
TTC28Q96AY4 AC110588.1-201ENST00000559699 137 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 AC007336.1-201ENST00000576365 3828 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC2.1□□□□□ -2.07
TTC28Q96AY4 AC120053.1-201ENST00000607706 736 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 MIR6734-201ENST00000621166 68 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC2.1□□□□□ -2.07
TTC28Q96AY4 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TTC28Q96AY4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TTC28Q96AY4 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TTC28Q96AY4 RPS20P25-201ENST00000412447 352 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 AC127526.1-201ENST00000417526 366 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 AC009263.1-201ENST00000441193 1239 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 FABP5P13-201ENST00000452144 328 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.1□□□□□ -2.07
TTC28Q96AY4 ARL4AP2-201ENST00000507378 601 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC2.1□□□□□ -2.07
TTC28Q96AY4 AC018690.1-201ENST00000608144 626 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 AL359715.5-201ENST00000623431 443 ntBASIC2.1□□□□□ -2.07
TTC28Q96AY4 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.09□□□□□ -2.07
TTC28Q96AY4 MAPK10-322ENST00000641485 4530 ntBASIC2.09□□□□□ -2.07
TTC28Q96AY4 MIR21-201ENST00000362134 72 ntBASIC2.09□□□□□ -2.07
TTC28Q96AY4 VN1R31P-201ENST00000417498 730 ntBASIC2.09□□□□□ -2.07
TTC28Q96AY4 AC234782.4-201ENST00000417646 1048 ntBASIC2.09□□□□□ -2.07
TTC28Q96AY4 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.09□□□□□ -2.07
TTC28Q96AY4 AC105402.2-201ENST00000438503 358 ntBASIC2.09□□□□□ -2.07
TTC28Q96AY4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC2.09□□□□□ -2.07
TTC28Q96AY4 AP001804.3-201ENST00000525146 880 ntBASIC2.09□□□□□ -2.07
TTC28Q96AY4 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.09□□□□□ -2.07
TTC28Q96AY4 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.09□□□□□ -2.07
TTC28Q96AY4 AC025281.1-201ENST00000567026 265 ntBASIC2.09□□□□□ -2.07
TTC28Q96AY4 AC116158.1-201ENST00000560231 2129 ntBASIC2.09□□□□□ -2.07
TTC28Q96AY4 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.08
TTC28Q96AY4 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
TTC28Q96AY4 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.09□□□□□ -2.08
TTC28Q96AY4 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.09□□□□□ -2.08
TTC28Q96AY4 AL358453.1-201ENST00000422522 250 ntBASIC2.09□□□□□ -2.08
TTC28Q96AY4 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
TTC28Q96AY4 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC2.09□□□□□ -2.08
TTC28Q96AY4 AC007620.3-201ENST00000608131 497 ntBASIC2.09□□□□□ -2.08
TTC28Q96AY4 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.09□□□□□ -2.08
TTC28Q96AY4 AC241377.1-201ENST00000619797 406 ntBASIC2.09□□□□□ -2.08
TTC28Q96AY4 DCAF13P1-201ENST00000495256 1330 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 PROS2P-201ENST00000474651 1951 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 Y_RNA.458-201ENST00000384240 102 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 AC073136.2-201ENST00000417282 849 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.08□□□□□ -2.08
TTC28Q96AY4 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC2.08□□□□□ -2.08
TTC28Q96AY4 AC087441.2-201ENST00000529141 262 ntBASIC2.08□□□□□ -2.08
TTC28Q96AY4 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.08□□□□□ -2.08
TTC28Q96AY4 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms